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Spatial assortment of soil organisms supports the size-plasticity hypothesis
The size-plasticity hypothesis posits that larger size organisms are less plastic in their metabolic rates and, therefore, are more strongly environmental-filtered than smaller organisms. Many studies have supported this hypothesis by evaluating the relative roles of environmental filtration and dis...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9723746/ https://www.ncbi.nlm.nih.gov/pubmed/37938741 http://dx.doi.org/10.1038/s43705-022-00185-6 |
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author | Isabwe, Alain Yao, Haifeng Zhang, Shixiu Jiang, Yuji Breed, Martin F. Sun, Xin |
author_facet | Isabwe, Alain Yao, Haifeng Zhang, Shixiu Jiang, Yuji Breed, Martin F. Sun, Xin |
author_sort | Isabwe, Alain |
collection | PubMed |
description | The size-plasticity hypothesis posits that larger size organisms are less plastic in their metabolic rates and, therefore, are more strongly environmental-filtered than smaller organisms. Many studies have supported this hypothesis by evaluating the relative roles of environmental filtration and dispersal for different taxonomic groups of soil organisms. Most observations are made at large spatial scales, which are assumed to have a wide array of varying habitats. However, since urbanization causes habitat fragmentation at smaller regional scales, testing the size-plasticity hypothesis at this scale would help better understand the spatial assortment of urban soil organisms which, in turn, would help to develop improved management and conservation strategies for urban soil health. Here, we used DNA metabarcoding on five groups of soil biota (bacteria, fungi, protists, nematodes, and invertebrates) to assess the relative importance of dispersal and environmental filters to examine the size-plasticity hypothesis at this spatial scale in an urban environment. We observed strong distance-decay of community similarities associated with higher levels of stochastic changes in bacteria, nematode, and protist communities but not fungal or invertebrate communities. Bacterial communities occupied the widest niche followed by protists and nematodes, potentially because of their higher dispersal abilities compared to the larger soil organisms. Null deviation of communities varied with taxonomic groups where bacteria and nematodes were mainly driven by homogenizing dispersal, protists and fungi by drift, and soil invertebrates by environmental selection. We further identified a small percentage of locally-adapted taxa (2.1%) that could be focal taxa for conservation and restoration efforts by, for example, restoring their habitats and enhancing their regional connectivity. These results support the size-plasticity hypothesis at the relatively unexplored regional scale in an urbanization context, and provide new information for improving urban soil health and sustainable city models. |
format | Online Article Text |
id | pubmed-9723746 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-97237462023-01-04 Spatial assortment of soil organisms supports the size-plasticity hypothesis Isabwe, Alain Yao, Haifeng Zhang, Shixiu Jiang, Yuji Breed, Martin F. Sun, Xin ISME Commun Article The size-plasticity hypothesis posits that larger size organisms are less plastic in their metabolic rates and, therefore, are more strongly environmental-filtered than smaller organisms. Many studies have supported this hypothesis by evaluating the relative roles of environmental filtration and dispersal for different taxonomic groups of soil organisms. Most observations are made at large spatial scales, which are assumed to have a wide array of varying habitats. However, since urbanization causes habitat fragmentation at smaller regional scales, testing the size-plasticity hypothesis at this scale would help better understand the spatial assortment of urban soil organisms which, in turn, would help to develop improved management and conservation strategies for urban soil health. Here, we used DNA metabarcoding on five groups of soil biota (bacteria, fungi, protists, nematodes, and invertebrates) to assess the relative importance of dispersal and environmental filters to examine the size-plasticity hypothesis at this spatial scale in an urban environment. We observed strong distance-decay of community similarities associated with higher levels of stochastic changes in bacteria, nematode, and protist communities but not fungal or invertebrate communities. Bacterial communities occupied the widest niche followed by protists and nematodes, potentially because of their higher dispersal abilities compared to the larger soil organisms. Null deviation of communities varied with taxonomic groups where bacteria and nematodes were mainly driven by homogenizing dispersal, protists and fungi by drift, and soil invertebrates by environmental selection. We further identified a small percentage of locally-adapted taxa (2.1%) that could be focal taxa for conservation and restoration efforts by, for example, restoring their habitats and enhancing their regional connectivity. These results support the size-plasticity hypothesis at the relatively unexplored regional scale in an urbanization context, and provide new information for improving urban soil health and sustainable city models. Nature Publishing Group UK 2022-10-19 /pmc/articles/PMC9723746/ /pubmed/37938741 http://dx.doi.org/10.1038/s43705-022-00185-6 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Isabwe, Alain Yao, Haifeng Zhang, Shixiu Jiang, Yuji Breed, Martin F. Sun, Xin Spatial assortment of soil organisms supports the size-plasticity hypothesis |
title | Spatial assortment of soil organisms supports the size-plasticity hypothesis |
title_full | Spatial assortment of soil organisms supports the size-plasticity hypothesis |
title_fullStr | Spatial assortment of soil organisms supports the size-plasticity hypothesis |
title_full_unstemmed | Spatial assortment of soil organisms supports the size-plasticity hypothesis |
title_short | Spatial assortment of soil organisms supports the size-plasticity hypothesis |
title_sort | spatial assortment of soil organisms supports the size-plasticity hypothesis |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9723746/ https://www.ncbi.nlm.nih.gov/pubmed/37938741 http://dx.doi.org/10.1038/s43705-022-00185-6 |
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