Cargando…

Multivariate trait analysis reveals diatom plasticity constrained to a reduced set of biological axes

Trait-based approaches to phytoplankton ecology have gained traction in recent decades as phenotypic traits are incorporated into ecological and biogeochemical models. Here, we use high-throughput phenotyping to explore both intra- and interspecific constraints on trait combinations that are express...

Descripción completa

Detalles Bibliográficos
Autores principales: Argyle, Phoebe A., Walworth, Nathan G., Hinners, Jana, Collins, Sinéad, Levine, Naomi M., Doblin, Martina A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9723791/
https://www.ncbi.nlm.nih.gov/pubmed/37938606
http://dx.doi.org/10.1038/s43705-021-00062-8
_version_ 1784844267629314048
author Argyle, Phoebe A.
Walworth, Nathan G.
Hinners, Jana
Collins, Sinéad
Levine, Naomi M.
Doblin, Martina A.
author_facet Argyle, Phoebe A.
Walworth, Nathan G.
Hinners, Jana
Collins, Sinéad
Levine, Naomi M.
Doblin, Martina A.
author_sort Argyle, Phoebe A.
collection PubMed
description Trait-based approaches to phytoplankton ecology have gained traction in recent decades as phenotypic traits are incorporated into ecological and biogeochemical models. Here, we use high-throughput phenotyping to explore both intra- and interspecific constraints on trait combinations that are expressed in the cosmopolitan marine diatom genus Thalassiosira. We demonstrate that within Thalassiosira, phenotypic diversity cannot be predicted from genotypic diversity, and moreover, plasticity can create highly divergent phenotypes that are incongruent with taxonomic grouping. Significantly, multivariate phenotypes can be represented in reduced dimensional space using principal component analysis with 77.7% of the variance captured by two orthogonal axes, here termed a ‘trait-scape’. Furthermore, this trait-scape can be recovered with a reduced set of traits. Plastic responses to the new environments expanded phenotypic trait values and the trait-scape, however, the overall pattern of response to the new environments was similar between strains and many trait correlations remained constant. These findings demonstrate that trait-scapes can be used to reveal common constraints on multi-trait plasticity in phytoplankton with divergent underlying phenotypes. Understanding how to integrate trait correlational constraints and trade-offs into theoretical frameworks like biogeochemical models will be critical to predict how microbial responses to environmental change will impact elemental cycling now and into the future.
format Online
Article
Text
id pubmed-9723791
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-97237912023-01-04 Multivariate trait analysis reveals diatom plasticity constrained to a reduced set of biological axes Argyle, Phoebe A. Walworth, Nathan G. Hinners, Jana Collins, Sinéad Levine, Naomi M. Doblin, Martina A. ISME Commun Article Trait-based approaches to phytoplankton ecology have gained traction in recent decades as phenotypic traits are incorporated into ecological and biogeochemical models. Here, we use high-throughput phenotyping to explore both intra- and interspecific constraints on trait combinations that are expressed in the cosmopolitan marine diatom genus Thalassiosira. We demonstrate that within Thalassiosira, phenotypic diversity cannot be predicted from genotypic diversity, and moreover, plasticity can create highly divergent phenotypes that are incongruent with taxonomic grouping. Significantly, multivariate phenotypes can be represented in reduced dimensional space using principal component analysis with 77.7% of the variance captured by two orthogonal axes, here termed a ‘trait-scape’. Furthermore, this trait-scape can be recovered with a reduced set of traits. Plastic responses to the new environments expanded phenotypic trait values and the trait-scape, however, the overall pattern of response to the new environments was similar between strains and many trait correlations remained constant. These findings demonstrate that trait-scapes can be used to reveal common constraints on multi-trait plasticity in phytoplankton with divergent underlying phenotypes. Understanding how to integrate trait correlational constraints and trade-offs into theoretical frameworks like biogeochemical models will be critical to predict how microbial responses to environmental change will impact elemental cycling now and into the future. Nature Publishing Group UK 2021-10-25 /pmc/articles/PMC9723791/ /pubmed/37938606 http://dx.doi.org/10.1038/s43705-021-00062-8 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Argyle, Phoebe A.
Walworth, Nathan G.
Hinners, Jana
Collins, Sinéad
Levine, Naomi M.
Doblin, Martina A.
Multivariate trait analysis reveals diatom plasticity constrained to a reduced set of biological axes
title Multivariate trait analysis reveals diatom plasticity constrained to a reduced set of biological axes
title_full Multivariate trait analysis reveals diatom plasticity constrained to a reduced set of biological axes
title_fullStr Multivariate trait analysis reveals diatom plasticity constrained to a reduced set of biological axes
title_full_unstemmed Multivariate trait analysis reveals diatom plasticity constrained to a reduced set of biological axes
title_short Multivariate trait analysis reveals diatom plasticity constrained to a reduced set of biological axes
title_sort multivariate trait analysis reveals diatom plasticity constrained to a reduced set of biological axes
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9723791/
https://www.ncbi.nlm.nih.gov/pubmed/37938606
http://dx.doi.org/10.1038/s43705-021-00062-8
work_keys_str_mv AT argylephoebea multivariatetraitanalysisrevealsdiatomplasticityconstrainedtoareducedsetofbiologicalaxes
AT walworthnathang multivariatetraitanalysisrevealsdiatomplasticityconstrainedtoareducedsetofbiologicalaxes
AT hinnersjana multivariatetraitanalysisrevealsdiatomplasticityconstrainedtoareducedsetofbiologicalaxes
AT collinssinead multivariatetraitanalysisrevealsdiatomplasticityconstrainedtoareducedsetofbiologicalaxes
AT levinenaomim multivariatetraitanalysisrevealsdiatomplasticityconstrainedtoareducedsetofbiologicalaxes
AT doblinmartinaa multivariatetraitanalysisrevealsdiatomplasticityconstrainedtoareducedsetofbiologicalaxes