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Machine learning for the prediction of minor amputation in University of Texas grade 3 diabetic foot ulcers
Minor amputations are performed in a large proportion of patients with diabetic foot ulcers (DFU) and early identification of the outcome of minor amputations facilitates medical decision-making and ultimately reduces major amputations and deaths. However, there are currently no clinical predictive...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Public Library of Science
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9725167/ https://www.ncbi.nlm.nih.gov/pubmed/36472981 http://dx.doi.org/10.1371/journal.pone.0278445 |
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author | Wang, Shiqi Wang, Jinwan Zhu, Mark Xuefang Tan, Qian |
author_facet | Wang, Shiqi Wang, Jinwan Zhu, Mark Xuefang Tan, Qian |
author_sort | Wang, Shiqi |
collection | PubMed |
description | Minor amputations are performed in a large proportion of patients with diabetic foot ulcers (DFU) and early identification of the outcome of minor amputations facilitates medical decision-making and ultimately reduces major amputations and deaths. However, there are currently no clinical predictive tools for minor amputations in patients with DFU. We aim to establish a predictive model based on machine learning to quickly identify patients requiring minor amputation among newly admitted patients with DFU. Overall, 362 cases with University of Texas grade (UT) 3 DFU were screened from tertiary care hospitals in East China. We utilized the synthetic minority oversampling strategy to compensate for the disparity in the initial dataset. A univariable analysis revealed nine variables to be included in the model: random blood glucose, years with diabetes, cardiovascular diseases, peripheral arterial diseases, DFU history, smoking history, albumin, creatinine, and C-reactive protein. Then, risk prediction models based on five machine learning algorithms: decision tree, random forest, logistic regression, support vector machine, and extreme gradient boosting (XGBoost) were independently developed with these variables. After evaluation, XGBoost earned the highest score (accuracy 0.814, precision 0.846, recall 0.767, F1-score 0.805, and AUC 0.881). For convenience, a web-based calculator based on our data and the XGBoost algorithm was established (https://dfuprediction.azurewebsites.net/). These findings imply that XGBoost can be used to develop a reliable prediction model for minor amputations in patients with UT3 DFU, and that our online calculator will make it easier for clinicians to assess the risk of minor amputations and make proactive decisions. |
format | Online Article Text |
id | pubmed-9725167 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-97251672022-12-07 Machine learning for the prediction of minor amputation in University of Texas grade 3 diabetic foot ulcers Wang, Shiqi Wang, Jinwan Zhu, Mark Xuefang Tan, Qian PLoS One Research Article Minor amputations are performed in a large proportion of patients with diabetic foot ulcers (DFU) and early identification of the outcome of minor amputations facilitates medical decision-making and ultimately reduces major amputations and deaths. However, there are currently no clinical predictive tools for minor amputations in patients with DFU. We aim to establish a predictive model based on machine learning to quickly identify patients requiring minor amputation among newly admitted patients with DFU. Overall, 362 cases with University of Texas grade (UT) 3 DFU were screened from tertiary care hospitals in East China. We utilized the synthetic minority oversampling strategy to compensate for the disparity in the initial dataset. A univariable analysis revealed nine variables to be included in the model: random blood glucose, years with diabetes, cardiovascular diseases, peripheral arterial diseases, DFU history, smoking history, albumin, creatinine, and C-reactive protein. Then, risk prediction models based on five machine learning algorithms: decision tree, random forest, logistic regression, support vector machine, and extreme gradient boosting (XGBoost) were independently developed with these variables. After evaluation, XGBoost earned the highest score (accuracy 0.814, precision 0.846, recall 0.767, F1-score 0.805, and AUC 0.881). For convenience, a web-based calculator based on our data and the XGBoost algorithm was established (https://dfuprediction.azurewebsites.net/). These findings imply that XGBoost can be used to develop a reliable prediction model for minor amputations in patients with UT3 DFU, and that our online calculator will make it easier for clinicians to assess the risk of minor amputations and make proactive decisions. Public Library of Science 2022-12-06 /pmc/articles/PMC9725167/ /pubmed/36472981 http://dx.doi.org/10.1371/journal.pone.0278445 Text en © 2022 Wang et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Wang, Shiqi Wang, Jinwan Zhu, Mark Xuefang Tan, Qian Machine learning for the prediction of minor amputation in University of Texas grade 3 diabetic foot ulcers |
title | Machine learning for the prediction of minor amputation in University of Texas grade 3 diabetic foot ulcers |
title_full | Machine learning for the prediction of minor amputation in University of Texas grade 3 diabetic foot ulcers |
title_fullStr | Machine learning for the prediction of minor amputation in University of Texas grade 3 diabetic foot ulcers |
title_full_unstemmed | Machine learning for the prediction of minor amputation in University of Texas grade 3 diabetic foot ulcers |
title_short | Machine learning for the prediction of minor amputation in University of Texas grade 3 diabetic foot ulcers |
title_sort | machine learning for the prediction of minor amputation in university of texas grade 3 diabetic foot ulcers |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9725167/ https://www.ncbi.nlm.nih.gov/pubmed/36472981 http://dx.doi.org/10.1371/journal.pone.0278445 |
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