Cargando…
A 12-year epidemiological study of Acinetobacter baumannii from blood culture isolates in a single tertiary-care hospital using polymerase chain reaction (PCR)–based open reading frame typing
OBJECTIVE: Acinetobacter baumannii is a causative agent of healthcare-associated infections, and the introduction and spread of A. baumannii that has acquired drug resistance within a hospital are serious healthcare problems. We investigated the transition of epidemic clones and the occurrence of ou...
Autores principales: | , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Cambridge University Press
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9726563/ https://www.ncbi.nlm.nih.gov/pubmed/36483408 http://dx.doi.org/10.1017/ash.2022.279 |
_version_ | 1784844817074749440 |
---|---|
author | Fujikura, Yuji Hamamoto, Takaaki Yuki, Atsushi Sampei, Ayumi Ichie, Nozomi Takamizawa, Kazuho Nomura, Sakika Serizawa, Yusuke Ohno, Tomohiro Tsujimoto, Hironori |
author_facet | Fujikura, Yuji Hamamoto, Takaaki Yuki, Atsushi Sampei, Ayumi Ichie, Nozomi Takamizawa, Kazuho Nomura, Sakika Serizawa, Yusuke Ohno, Tomohiro Tsujimoto, Hironori |
author_sort | Fujikura, Yuji |
collection | PubMed |
description | OBJECTIVE: Acinetobacter baumannii is a causative agent of healthcare-associated infections, and the introduction and spread of A. baumannii that has acquired drug resistance within a hospital are serious healthcare problems. We investigated the transition of epidemic clones and the occurrence of outbreaks by molecular epidemiological analysis to understand the long-term behavior of A. baumannii within a single facility. METHODS: A. baumannii isolates collected from blood-culture–positive patients between January 2009 and December 2020 were subjected to PCR-based open reading frame typing (POT) for species identification, clonal typing, and homology searches. RESULTS: Of the strains isolated from blood cultures, 49 were identified as A. baumannii and analyzed with POT. The POT#1=122 clones had different antimicrobial resistance profiles to the other POT clones, and strains belonging to this clone were dominant during outbreaks of multidrug-resistant Acinetobacter. Although the clonal diversity of A. baumannii decreased and its antimicrobial resistance increased during the outbreaks, clonal diversity and the in-hospital antibiogram improved at the end of the outbreaks. The POT#1=122 clone was not eliminated from the hospital during the study period. CONCLUSIONS: POT is a simple and suitable method for molecular epidemiological monitoring and can show the introduction, outbreak, and subsequent transition of an epidemic clone of A. baumannii. |
format | Online Article Text |
id | pubmed-9726563 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Cambridge University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-97265632022-12-07 A 12-year epidemiological study of Acinetobacter baumannii from blood culture isolates in a single tertiary-care hospital using polymerase chain reaction (PCR)–based open reading frame typing Fujikura, Yuji Hamamoto, Takaaki Yuki, Atsushi Sampei, Ayumi Ichie, Nozomi Takamizawa, Kazuho Nomura, Sakika Serizawa, Yusuke Ohno, Tomohiro Tsujimoto, Hironori Antimicrob Steward Healthc Epidemiol Original Article OBJECTIVE: Acinetobacter baumannii is a causative agent of healthcare-associated infections, and the introduction and spread of A. baumannii that has acquired drug resistance within a hospital are serious healthcare problems. We investigated the transition of epidemic clones and the occurrence of outbreaks by molecular epidemiological analysis to understand the long-term behavior of A. baumannii within a single facility. METHODS: A. baumannii isolates collected from blood-culture–positive patients between January 2009 and December 2020 were subjected to PCR-based open reading frame typing (POT) for species identification, clonal typing, and homology searches. RESULTS: Of the strains isolated from blood cultures, 49 were identified as A. baumannii and analyzed with POT. The POT#1=122 clones had different antimicrobial resistance profiles to the other POT clones, and strains belonging to this clone were dominant during outbreaks of multidrug-resistant Acinetobacter. Although the clonal diversity of A. baumannii decreased and its antimicrobial resistance increased during the outbreaks, clonal diversity and the in-hospital antibiogram improved at the end of the outbreaks. The POT#1=122 clone was not eliminated from the hospital during the study period. CONCLUSIONS: POT is a simple and suitable method for molecular epidemiological monitoring and can show the introduction, outbreak, and subsequent transition of an epidemic clone of A. baumannii. Cambridge University Press 2022-08-08 /pmc/articles/PMC9726563/ /pubmed/36483408 http://dx.doi.org/10.1017/ash.2022.279 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/This is an Open Access article, distributed under the terms of the Creative Commons Attribution licence (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted re-use, distribution and reproduction, provided the original article is properly cited. |
spellingShingle | Original Article Fujikura, Yuji Hamamoto, Takaaki Yuki, Atsushi Sampei, Ayumi Ichie, Nozomi Takamizawa, Kazuho Nomura, Sakika Serizawa, Yusuke Ohno, Tomohiro Tsujimoto, Hironori A 12-year epidemiological study of Acinetobacter baumannii from blood culture isolates in a single tertiary-care hospital using polymerase chain reaction (PCR)–based open reading frame typing |
title | A 12-year epidemiological study of Acinetobacter baumannii from blood culture isolates in a single tertiary-care hospital using polymerase chain reaction (PCR)–based open reading frame typing |
title_full | A 12-year epidemiological study of Acinetobacter baumannii from blood culture isolates in a single tertiary-care hospital using polymerase chain reaction (PCR)–based open reading frame typing |
title_fullStr | A 12-year epidemiological study of Acinetobacter baumannii from blood culture isolates in a single tertiary-care hospital using polymerase chain reaction (PCR)–based open reading frame typing |
title_full_unstemmed | A 12-year epidemiological study of Acinetobacter baumannii from blood culture isolates in a single tertiary-care hospital using polymerase chain reaction (PCR)–based open reading frame typing |
title_short | A 12-year epidemiological study of Acinetobacter baumannii from blood culture isolates in a single tertiary-care hospital using polymerase chain reaction (PCR)–based open reading frame typing |
title_sort | 12-year epidemiological study of acinetobacter baumannii from blood culture isolates in a single tertiary-care hospital using polymerase chain reaction (pcr)–based open reading frame typing |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9726563/ https://www.ncbi.nlm.nih.gov/pubmed/36483408 http://dx.doi.org/10.1017/ash.2022.279 |
work_keys_str_mv | AT fujikurayuji a12yearepidemiologicalstudyofacinetobacterbaumanniifrombloodcultureisolatesinasingletertiarycarehospitalusingpolymerasechainreactionpcrbasedopenreadingframetyping AT hamamototakaaki a12yearepidemiologicalstudyofacinetobacterbaumanniifrombloodcultureisolatesinasingletertiarycarehospitalusingpolymerasechainreactionpcrbasedopenreadingframetyping AT yukiatsushi a12yearepidemiologicalstudyofacinetobacterbaumanniifrombloodcultureisolatesinasingletertiarycarehospitalusingpolymerasechainreactionpcrbasedopenreadingframetyping AT sampeiayumi a12yearepidemiologicalstudyofacinetobacterbaumanniifrombloodcultureisolatesinasingletertiarycarehospitalusingpolymerasechainreactionpcrbasedopenreadingframetyping AT ichienozomi a12yearepidemiologicalstudyofacinetobacterbaumanniifrombloodcultureisolatesinasingletertiarycarehospitalusingpolymerasechainreactionpcrbasedopenreadingframetyping AT takamizawakazuho a12yearepidemiologicalstudyofacinetobacterbaumanniifrombloodcultureisolatesinasingletertiarycarehospitalusingpolymerasechainreactionpcrbasedopenreadingframetyping AT nomurasakika a12yearepidemiologicalstudyofacinetobacterbaumanniifrombloodcultureisolatesinasingletertiarycarehospitalusingpolymerasechainreactionpcrbasedopenreadingframetyping AT serizawayusuke a12yearepidemiologicalstudyofacinetobacterbaumanniifrombloodcultureisolatesinasingletertiarycarehospitalusingpolymerasechainreactionpcrbasedopenreadingframetyping AT ohnotomohiro a12yearepidemiologicalstudyofacinetobacterbaumanniifrombloodcultureisolatesinasingletertiarycarehospitalusingpolymerasechainreactionpcrbasedopenreadingframetyping AT tsujimotohironori a12yearepidemiologicalstudyofacinetobacterbaumanniifrombloodcultureisolatesinasingletertiarycarehospitalusingpolymerasechainreactionpcrbasedopenreadingframetyping AT fujikurayuji 12yearepidemiologicalstudyofacinetobacterbaumanniifrombloodcultureisolatesinasingletertiarycarehospitalusingpolymerasechainreactionpcrbasedopenreadingframetyping AT hamamototakaaki 12yearepidemiologicalstudyofacinetobacterbaumanniifrombloodcultureisolatesinasingletertiarycarehospitalusingpolymerasechainreactionpcrbasedopenreadingframetyping AT yukiatsushi 12yearepidemiologicalstudyofacinetobacterbaumanniifrombloodcultureisolatesinasingletertiarycarehospitalusingpolymerasechainreactionpcrbasedopenreadingframetyping AT sampeiayumi 12yearepidemiologicalstudyofacinetobacterbaumanniifrombloodcultureisolatesinasingletertiarycarehospitalusingpolymerasechainreactionpcrbasedopenreadingframetyping AT ichienozomi 12yearepidemiologicalstudyofacinetobacterbaumanniifrombloodcultureisolatesinasingletertiarycarehospitalusingpolymerasechainreactionpcrbasedopenreadingframetyping AT takamizawakazuho 12yearepidemiologicalstudyofacinetobacterbaumanniifrombloodcultureisolatesinasingletertiarycarehospitalusingpolymerasechainreactionpcrbasedopenreadingframetyping AT nomurasakika 12yearepidemiologicalstudyofacinetobacterbaumanniifrombloodcultureisolatesinasingletertiarycarehospitalusingpolymerasechainreactionpcrbasedopenreadingframetyping AT serizawayusuke 12yearepidemiologicalstudyofacinetobacterbaumanniifrombloodcultureisolatesinasingletertiarycarehospitalusingpolymerasechainreactionpcrbasedopenreadingframetyping AT ohnotomohiro 12yearepidemiologicalstudyofacinetobacterbaumanniifrombloodcultureisolatesinasingletertiarycarehospitalusingpolymerasechainreactionpcrbasedopenreadingframetyping AT tsujimotohironori 12yearepidemiologicalstudyofacinetobacterbaumanniifrombloodcultureisolatesinasingletertiarycarehospitalusingpolymerasechainreactionpcrbasedopenreadingframetyping |