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A proof of concept for a deep learning system that can aid embryologists in predicting blastocyst survival after thaw

The ability to understand whether embryos survive the thaw process is crucial to transferring competent embryos that can lead to pregnancy. The objective of this study was to develop a proof of concept deep learning model capable of assisting embryologist assessment of survival of thawed blastocysts...

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Autores principales: Marsh, P., Radif, D., Rajpurkar, P., Wang, Z., Hariton, E., Ribeiro, S., Simbulan, R., Kaing, A., Lin, W., Rajah, A., Rabara, F., Lungren, M., Demirci, U., Ng, A., Rosen, M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9729222/
https://www.ncbi.nlm.nih.gov/pubmed/36477633
http://dx.doi.org/10.1038/s41598-022-25062-z
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author Marsh, P.
Radif, D.
Rajpurkar, P.
Wang, Z.
Hariton, E.
Ribeiro, S.
Simbulan, R.
Kaing, A.
Lin, W.
Rajah, A.
Rabara, F.
Lungren, M.
Demirci, U.
Ng, A.
Rosen, M.
author_facet Marsh, P.
Radif, D.
Rajpurkar, P.
Wang, Z.
Hariton, E.
Ribeiro, S.
Simbulan, R.
Kaing, A.
Lin, W.
Rajah, A.
Rabara, F.
Lungren, M.
Demirci, U.
Ng, A.
Rosen, M.
author_sort Marsh, P.
collection PubMed
description The ability to understand whether embryos survive the thaw process is crucial to transferring competent embryos that can lead to pregnancy. The objective of this study was to develop a proof of concept deep learning model capable of assisting embryologist assessment of survival of thawed blastocysts prior to embryo transfer. A deep learning model was developed using 652 labeled time-lapse videos of freeze–thaw blastocysts. The model was evaluated against and along embryologists on a test set of 99 freeze–thaw blastocysts, using images obtained at 0.5 h increments from 0 to 3 h post-thaw. The model achieved AUCs of 0.869 (95% CI 0.789, 0.934) and 0.807 (95% CI 0.717, 0.886) and the embryologists achieved average AUCs of 0.829 (95% CI 0.747, 0.896) and 0.850 (95% CI 0.773, 0.908) at 2 h and 3 h, respectively. Combining embryologist predictions with model predictions resulted in a significant increase in AUC of 0.051 (95% CI 0.021, 0.083) at 2 h, and an equivalent increase in AUC of 0.010 (95% CI −0.018, 0.037) at 3 h. This study suggests that a deep learning model can predict in vitro blastocyst survival after thaw in aneuploid embryos. After correlation with clinical outcomes of transferred embryos, this model may help embryologists ascertain which embryos may have failed to survive the thaw process and increase the likelihood of pregnancy by preventing the transfer of non-viable embryos.
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spelling pubmed-97292222022-12-09 A proof of concept for a deep learning system that can aid embryologists in predicting blastocyst survival after thaw Marsh, P. Radif, D. Rajpurkar, P. Wang, Z. Hariton, E. Ribeiro, S. Simbulan, R. Kaing, A. Lin, W. Rajah, A. Rabara, F. Lungren, M. Demirci, U. Ng, A. Rosen, M. Sci Rep Article The ability to understand whether embryos survive the thaw process is crucial to transferring competent embryos that can lead to pregnancy. The objective of this study was to develop a proof of concept deep learning model capable of assisting embryologist assessment of survival of thawed blastocysts prior to embryo transfer. A deep learning model was developed using 652 labeled time-lapse videos of freeze–thaw blastocysts. The model was evaluated against and along embryologists on a test set of 99 freeze–thaw blastocysts, using images obtained at 0.5 h increments from 0 to 3 h post-thaw. The model achieved AUCs of 0.869 (95% CI 0.789, 0.934) and 0.807 (95% CI 0.717, 0.886) and the embryologists achieved average AUCs of 0.829 (95% CI 0.747, 0.896) and 0.850 (95% CI 0.773, 0.908) at 2 h and 3 h, respectively. Combining embryologist predictions with model predictions resulted in a significant increase in AUC of 0.051 (95% CI 0.021, 0.083) at 2 h, and an equivalent increase in AUC of 0.010 (95% CI −0.018, 0.037) at 3 h. This study suggests that a deep learning model can predict in vitro blastocyst survival after thaw in aneuploid embryos. After correlation with clinical outcomes of transferred embryos, this model may help embryologists ascertain which embryos may have failed to survive the thaw process and increase the likelihood of pregnancy by preventing the transfer of non-viable embryos. Nature Publishing Group UK 2022-12-07 /pmc/articles/PMC9729222/ /pubmed/36477633 http://dx.doi.org/10.1038/s41598-022-25062-z Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Marsh, P.
Radif, D.
Rajpurkar, P.
Wang, Z.
Hariton, E.
Ribeiro, S.
Simbulan, R.
Kaing, A.
Lin, W.
Rajah, A.
Rabara, F.
Lungren, M.
Demirci, U.
Ng, A.
Rosen, M.
A proof of concept for a deep learning system that can aid embryologists in predicting blastocyst survival after thaw
title A proof of concept for a deep learning system that can aid embryologists in predicting blastocyst survival after thaw
title_full A proof of concept for a deep learning system that can aid embryologists in predicting blastocyst survival after thaw
title_fullStr A proof of concept for a deep learning system that can aid embryologists in predicting blastocyst survival after thaw
title_full_unstemmed A proof of concept for a deep learning system that can aid embryologists in predicting blastocyst survival after thaw
title_short A proof of concept for a deep learning system that can aid embryologists in predicting blastocyst survival after thaw
title_sort proof of concept for a deep learning system that can aid embryologists in predicting blastocyst survival after thaw
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9729222/
https://www.ncbi.nlm.nih.gov/pubmed/36477633
http://dx.doi.org/10.1038/s41598-022-25062-z
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