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Experimental Verification of Inferred Regulatory Interactions of EARLY FLOWERING 3 ( GmELF3-1 ) in Glycine max
Understanding the roles of evening complex (EC) genes in the circadian clock of plants can inform how diurnal transcriptional loops in the clock gene network function to regulate key physiological and developmental events, including flowering transition. Gene regulatory interactions among soybean’s...
| Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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| Formato: | Online Artículo Texto |
| Lenguaje: | English |
| Publicado: |
Caltech Library
2022
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| Materias: | |
| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9729981/ https://www.ncbi.nlm.nih.gov/pubmed/36506349 http://dx.doi.org/10.17912/micropub.biology.000687 |
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| author | Alcantara, Michelle Acosta, Patrick Azatian, Ara Calderon, Carlos Candray, Kevin Castillo, Natalie Coria-Gomez, Luis Duran, Jose Fam, Justina Hernandez-Segura, Diego Hidalgo, Lennix Huerta, Carlos Jordan, Shane Kagan, Kimberly Loya, Karla Martinez, Eduardo Musaev, Kirill Navarro, Roxana Nazarians, Narek Paglia, Robert Robles, Gabriela Simmons, Taylor Smith, Shawn Soudani, Faisel Valenzuela, Emily Villalobos, Jessica Iftikhar, Hira Hanzawa, Yoshie |
| author_facet | Alcantara, Michelle Acosta, Patrick Azatian, Ara Calderon, Carlos Candray, Kevin Castillo, Natalie Coria-Gomez, Luis Duran, Jose Fam, Justina Hernandez-Segura, Diego Hidalgo, Lennix Huerta, Carlos Jordan, Shane Kagan, Kimberly Loya, Karla Martinez, Eduardo Musaev, Kirill Navarro, Roxana Nazarians, Narek Paglia, Robert Robles, Gabriela Simmons, Taylor Smith, Shawn Soudani, Faisel Valenzuela, Emily Villalobos, Jessica Iftikhar, Hira Hanzawa, Yoshie |
| author_sort | Alcantara, Michelle |
| collection | PubMed |
| description | Understanding the roles of evening complex (EC) genes in the circadian clock of plants can inform how diurnal transcriptional loops in the clock gene network function to regulate key physiological and developmental events, including flowering transition. Gene regulatory interactions among soybean’s circadian clock and flowering genes were inferred using time-series RNA-seq data and the network inference algorithmic package CausNet. In this study, we seek to clarify the inferred regulatory interactions of the EC gene GmELF3-1. A gene expression analysis using soybean protoplasts as a transient model indicated regulatory roles of GmELF3-1 in expression of selected flowering genes. |
| format | Online Article Text |
| id | pubmed-9729981 |
| institution | National Center for Biotechnology Information |
| language | English |
| publishDate | 2022 |
| publisher | Caltech Library |
| record_format | MEDLINE/PubMed |
| spelling | pubmed-97299812022-12-09 Experimental Verification of Inferred Regulatory Interactions of EARLY FLOWERING 3 ( GmELF3-1 ) in Glycine max Alcantara, Michelle Acosta, Patrick Azatian, Ara Calderon, Carlos Candray, Kevin Castillo, Natalie Coria-Gomez, Luis Duran, Jose Fam, Justina Hernandez-Segura, Diego Hidalgo, Lennix Huerta, Carlos Jordan, Shane Kagan, Kimberly Loya, Karla Martinez, Eduardo Musaev, Kirill Navarro, Roxana Nazarians, Narek Paglia, Robert Robles, Gabriela Simmons, Taylor Smith, Shawn Soudani, Faisel Valenzuela, Emily Villalobos, Jessica Iftikhar, Hira Hanzawa, Yoshie MicroPubl Biol New Finding Understanding the roles of evening complex (EC) genes in the circadian clock of plants can inform how diurnal transcriptional loops in the clock gene network function to regulate key physiological and developmental events, including flowering transition. Gene regulatory interactions among soybean’s circadian clock and flowering genes were inferred using time-series RNA-seq data and the network inference algorithmic package CausNet. In this study, we seek to clarify the inferred regulatory interactions of the EC gene GmELF3-1. A gene expression analysis using soybean protoplasts as a transient model indicated regulatory roles of GmELF3-1 in expression of selected flowering genes. Caltech Library 2022-11-22 /pmc/articles/PMC9729981/ /pubmed/36506349 http://dx.doi.org/10.17912/micropub.biology.000687 Text en Copyright: © 2022 by the authors https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
| spellingShingle | New Finding Alcantara, Michelle Acosta, Patrick Azatian, Ara Calderon, Carlos Candray, Kevin Castillo, Natalie Coria-Gomez, Luis Duran, Jose Fam, Justina Hernandez-Segura, Diego Hidalgo, Lennix Huerta, Carlos Jordan, Shane Kagan, Kimberly Loya, Karla Martinez, Eduardo Musaev, Kirill Navarro, Roxana Nazarians, Narek Paglia, Robert Robles, Gabriela Simmons, Taylor Smith, Shawn Soudani, Faisel Valenzuela, Emily Villalobos, Jessica Iftikhar, Hira Hanzawa, Yoshie Experimental Verification of Inferred Regulatory Interactions of EARLY FLOWERING 3 ( GmELF3-1 ) in Glycine max |
| title |
Experimental Verification of Inferred Regulatory Interactions of
EARLY FLOWERING 3
(
GmELF3-1
)
in
Glycine max
|
| title_full |
Experimental Verification of Inferred Regulatory Interactions of
EARLY FLOWERING 3
(
GmELF3-1
)
in
Glycine max
|
| title_fullStr |
Experimental Verification of Inferred Regulatory Interactions of
EARLY FLOWERING 3
(
GmELF3-1
)
in
Glycine max
|
| title_full_unstemmed |
Experimental Verification of Inferred Regulatory Interactions of
EARLY FLOWERING 3
(
GmELF3-1
)
in
Glycine max
|
| title_short |
Experimental Verification of Inferred Regulatory Interactions of
EARLY FLOWERING 3
(
GmELF3-1
)
in
Glycine max
|
| title_sort | experimental verification of inferred regulatory interactions of
early flowering 3
(
gmelf3-1
)
in
glycine max |
| topic | New Finding |
| url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9729981/ https://www.ncbi.nlm.nih.gov/pubmed/36506349 http://dx.doi.org/10.17912/micropub.biology.000687 |
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