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phoD-harboring bacterial community composition dominates organic P mineralization under long-term P fertilization in acid purple soil

INTRODUCTION: A better understanding of the regulatory role of microorganisms on soil phosphorous (P) mobilization is critical for developing sustainable fertilization practices and reducing P resource scarcity. The phoD genes regulate soil organic P (Po) mobilization. METHODS: Based on the long-ter...

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Autores principales: Lang, Ming, Li, Haoming, Lakshmanan, Prakash, Chen, Yuanxue, Chen, Xinping
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9730253/
https://www.ncbi.nlm.nih.gov/pubmed/36504812
http://dx.doi.org/10.3389/fmicb.2022.1045919
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author Lang, Ming
Li, Haoming
Lakshmanan, Prakash
Chen, Yuanxue
Chen, Xinping
author_facet Lang, Ming
Li, Haoming
Lakshmanan, Prakash
Chen, Yuanxue
Chen, Xinping
author_sort Lang, Ming
collection PubMed
description INTRODUCTION: A better understanding of the regulatory role of microorganisms on soil phosphorous (P) mobilization is critical for developing sustainable fertilization practices and reducing P resource scarcity. The phoD genes regulate soil organic P (Po) mobilization. METHODS: Based on the long-term P application experiments in acid purple soil of maize system in Southwest China (started in 2010), the experiment included five P levels: 0, 16, 33, 49, and 65.5 kg P hm(–2) (P0, P16, P33, P49, and P65.5, respectively). The molecular speciation of organic P in soil was determined by 31P-nuclear magnetic resonance (NMR), high-throughput sequencing technology, and real-time qPCR were used to analyze the bacterial community and abundance of phoD-harboring bacterial genes, exploring the bacterial community and abundance characteristics of phoD gene and its relationship with the forms of Po and alkaline phosphatase (ALP) activity in the soil. RESULTS: The results showed that the orthophosphate monoesters (OM) were the main Po speciation and varied by P fertilization in acid purple soil. ALP activity decreased as P fertilization increased. Co-occurrence network analysis identified the overall network under five P fertilizations. The keystone taxon base on the network showed that Collimonas, Roseateles, Mesorhizobium, and Cellulomonas positively correlated with both OM and Po. The random forest showed that Cellulomonas, Roseateles, and Rhodoplanes were the key predictors for ALP activity. The keystone taxon was a more important predictor than the dominant taxon for ALP, OM, and Po. The structural equation model (SEM) showed that soil organic matter (SOM), available P (AP), and OM were the main factors influencing the ALP by reshaping phoD-harboring bacteria alpha diversity, community composition, and phoD abundance. DISCUSSION: The phoD-harboring bacterial community composition especially the keystone taxon rather than alpha diversity and abundance dominated the ALP activity, which could promote P utilization over an intensive agroecosystem. These findings improve the understanding of how long-term gradient fertilization influences the community composition and function of P-solubilizing microorganisms in acid purple soil.
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spelling pubmed-97302532022-12-09 phoD-harboring bacterial community composition dominates organic P mineralization under long-term P fertilization in acid purple soil Lang, Ming Li, Haoming Lakshmanan, Prakash Chen, Yuanxue Chen, Xinping Front Microbiol Microbiology INTRODUCTION: A better understanding of the regulatory role of microorganisms on soil phosphorous (P) mobilization is critical for developing sustainable fertilization practices and reducing P resource scarcity. The phoD genes regulate soil organic P (Po) mobilization. METHODS: Based on the long-term P application experiments in acid purple soil of maize system in Southwest China (started in 2010), the experiment included five P levels: 0, 16, 33, 49, and 65.5 kg P hm(–2) (P0, P16, P33, P49, and P65.5, respectively). The molecular speciation of organic P in soil was determined by 31P-nuclear magnetic resonance (NMR), high-throughput sequencing technology, and real-time qPCR were used to analyze the bacterial community and abundance of phoD-harboring bacterial genes, exploring the bacterial community and abundance characteristics of phoD gene and its relationship with the forms of Po and alkaline phosphatase (ALP) activity in the soil. RESULTS: The results showed that the orthophosphate monoesters (OM) were the main Po speciation and varied by P fertilization in acid purple soil. ALP activity decreased as P fertilization increased. Co-occurrence network analysis identified the overall network under five P fertilizations. The keystone taxon base on the network showed that Collimonas, Roseateles, Mesorhizobium, and Cellulomonas positively correlated with both OM and Po. The random forest showed that Cellulomonas, Roseateles, and Rhodoplanes were the key predictors for ALP activity. The keystone taxon was a more important predictor than the dominant taxon for ALP, OM, and Po. The structural equation model (SEM) showed that soil organic matter (SOM), available P (AP), and OM were the main factors influencing the ALP by reshaping phoD-harboring bacteria alpha diversity, community composition, and phoD abundance. DISCUSSION: The phoD-harboring bacterial community composition especially the keystone taxon rather than alpha diversity and abundance dominated the ALP activity, which could promote P utilization over an intensive agroecosystem. These findings improve the understanding of how long-term gradient fertilization influences the community composition and function of P-solubilizing microorganisms in acid purple soil. Frontiers Media S.A. 2022-11-24 /pmc/articles/PMC9730253/ /pubmed/36504812 http://dx.doi.org/10.3389/fmicb.2022.1045919 Text en Copyright © 2022 Lang, Li, Lakshmanan, Chen and Chen. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Lang, Ming
Li, Haoming
Lakshmanan, Prakash
Chen, Yuanxue
Chen, Xinping
phoD-harboring bacterial community composition dominates organic P mineralization under long-term P fertilization in acid purple soil
title phoD-harboring bacterial community composition dominates organic P mineralization under long-term P fertilization in acid purple soil
title_full phoD-harboring bacterial community composition dominates organic P mineralization under long-term P fertilization in acid purple soil
title_fullStr phoD-harboring bacterial community composition dominates organic P mineralization under long-term P fertilization in acid purple soil
title_full_unstemmed phoD-harboring bacterial community composition dominates organic P mineralization under long-term P fertilization in acid purple soil
title_short phoD-harboring bacterial community composition dominates organic P mineralization under long-term P fertilization in acid purple soil
title_sort phod-harboring bacterial community composition dominates organic p mineralization under long-term p fertilization in acid purple soil
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9730253/
https://www.ncbi.nlm.nih.gov/pubmed/36504812
http://dx.doi.org/10.3389/fmicb.2022.1045919
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