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Inferring the temporal evolution of synaptic weights from dynamic functional connectivity
How to capture the temporal evolution of synaptic weights from measures of dynamic functional connectivity between the activity of different simultaneously recorded neurons is an important and open problem in systems neuroscience. Here, we report methodological progress to address this issue. We fir...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Berlin Heidelberg
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9732068/ https://www.ncbi.nlm.nih.gov/pubmed/36480076 http://dx.doi.org/10.1186/s40708-022-00178-0 |
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author | Celotto, Marco Lemke, Stefan Panzeri, Stefano |
author_facet | Celotto, Marco Lemke, Stefan Panzeri, Stefano |
author_sort | Celotto, Marco |
collection | PubMed |
description | How to capture the temporal evolution of synaptic weights from measures of dynamic functional connectivity between the activity of different simultaneously recorded neurons is an important and open problem in systems neuroscience. Here, we report methodological progress to address this issue. We first simulated recurrent neural network models of spiking neurons with spike timing-dependent plasticity mechanisms that generate time-varying synaptic and functional coupling. We then used these simulations to test analytical approaches that infer fixed and time-varying properties of synaptic connectivity from directed functional connectivity measures, such as cross-covariance and transfer entropy. We found that, while both cross-covariance and transfer entropy provide robust estimates of which synapses are present in the network and their communication delays, dynamic functional connectivity measured via cross-covariance better captures the evolution of synaptic weights over time. We also established how measures of information transmission delays from static functional connectivity computed over long recording periods (i.e., several hours) can improve shorter time-scale estimates of the temporal evolution of synaptic weights from dynamic functional connectivity. These results provide useful information about how to accurately estimate the temporal variation of synaptic strength from spiking activity measures. |
format | Online Article Text |
id | pubmed-9732068 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Springer Berlin Heidelberg |
record_format | MEDLINE/PubMed |
spelling | pubmed-97320682022-12-10 Inferring the temporal evolution of synaptic weights from dynamic functional connectivity Celotto, Marco Lemke, Stefan Panzeri, Stefano Brain Inform Research How to capture the temporal evolution of synaptic weights from measures of dynamic functional connectivity between the activity of different simultaneously recorded neurons is an important and open problem in systems neuroscience. Here, we report methodological progress to address this issue. We first simulated recurrent neural network models of spiking neurons with spike timing-dependent plasticity mechanisms that generate time-varying synaptic and functional coupling. We then used these simulations to test analytical approaches that infer fixed and time-varying properties of synaptic connectivity from directed functional connectivity measures, such as cross-covariance and transfer entropy. We found that, while both cross-covariance and transfer entropy provide robust estimates of which synapses are present in the network and their communication delays, dynamic functional connectivity measured via cross-covariance better captures the evolution of synaptic weights over time. We also established how measures of information transmission delays from static functional connectivity computed over long recording periods (i.e., several hours) can improve shorter time-scale estimates of the temporal evolution of synaptic weights from dynamic functional connectivity. These results provide useful information about how to accurately estimate the temporal variation of synaptic strength from spiking activity measures. Springer Berlin Heidelberg 2022-12-08 /pmc/articles/PMC9732068/ /pubmed/36480076 http://dx.doi.org/10.1186/s40708-022-00178-0 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Research Celotto, Marco Lemke, Stefan Panzeri, Stefano Inferring the temporal evolution of synaptic weights from dynamic functional connectivity |
title | Inferring the temporal evolution of synaptic weights from dynamic functional connectivity |
title_full | Inferring the temporal evolution of synaptic weights from dynamic functional connectivity |
title_fullStr | Inferring the temporal evolution of synaptic weights from dynamic functional connectivity |
title_full_unstemmed | Inferring the temporal evolution of synaptic weights from dynamic functional connectivity |
title_short | Inferring the temporal evolution of synaptic weights from dynamic functional connectivity |
title_sort | inferring the temporal evolution of synaptic weights from dynamic functional connectivity |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9732068/ https://www.ncbi.nlm.nih.gov/pubmed/36480076 http://dx.doi.org/10.1186/s40708-022-00178-0 |
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