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MSGANet-RAV: A multiscale guided attention network for artery-vein segmentation and classification from optic disc and retinal images

BACKGROUND: Retinal and optic disc images are used to assess changes in the retinal vasculature. These can be changes associated with diseases such as diabetic retinopathy and glaucoma or induced using ophthalmodynamometry to measure arterial and venous pressure. Key steps toward automating the asse...

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Autores principales: Chowdhury, A Z M Ehtesham, Mann, Graham, Morgan, William Huxley, Vukmirovic, Aleksandar, Mehnert, Andrew, Sohel, Ferdous
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9732479/
https://www.ncbi.nlm.nih.gov/pubmed/36396540
http://dx.doi.org/10.1016/j.optom.2022.11.001
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author Chowdhury, A Z M Ehtesham
Mann, Graham
Morgan, William Huxley
Vukmirovic, Aleksandar
Mehnert, Andrew
Sohel, Ferdous
author_facet Chowdhury, A Z M Ehtesham
Mann, Graham
Morgan, William Huxley
Vukmirovic, Aleksandar
Mehnert, Andrew
Sohel, Ferdous
author_sort Chowdhury, A Z M Ehtesham
collection PubMed
description BACKGROUND: Retinal and optic disc images are used to assess changes in the retinal vasculature. These can be changes associated with diseases such as diabetic retinopathy and glaucoma or induced using ophthalmodynamometry to measure arterial and venous pressure. Key steps toward automating the assessment of these changes are the segmentation and classification of the veins and arteries. However, such segmentation and classification are still required to be manually labelled by experts. Such automated labelling is challenging because of the complex morphology, anatomical variations, alterations due to disease and scarcity of labelled data for algorithm development. We present a deep machine learning solution called the multiscale guided attention network for retinal artery and vein segmentation and classification (MSGANet-RAV). METHODS: MSGANet-RAV was developed and tested on 383 colour clinical optic disc images from LEI-CENTRAL, constructed in-house and 40 colour fundus images from the AV-DRIVE public dataset. The datasets have a mean optic disc occupancy per image of 60.6% and 2.18%, respectively. MSGANet-RAV is a U-shaped encoder-decoder network, where the encoder extracts multiscale features, and the decoder includes a sequence of self-attention modules. The self-attention modules explore, guide and incorporate vessel-specific structural and contextual feature information to segment and classify central optic disc and retinal vessel pixels. RESULTS: MSGANet-RAV achieved a pixel classification accuracy of 93.15%, sensitivity of 92.19%, and specificity of 94.13% on LEI-CENTRAL, outperforming several reference models. It similarly performed highly on AV-DRIVE with an accuracy, sensitivity and specificity of 95.48%, 93.59% and 97.27%, respectively. CONCLUSION: The results show the efficacy of MSGANet-RAV for identifying central optic disc and retinal arteries and veins. The method can be used in automated systems designed to assess vascular changes in retinal and optic disc images quantitatively.
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spelling pubmed-97324792022-12-10 MSGANet-RAV: A multiscale guided attention network for artery-vein segmentation and classification from optic disc and retinal images Chowdhury, A Z M Ehtesham Mann, Graham Morgan, William Huxley Vukmirovic, Aleksandar Mehnert, Andrew Sohel, Ferdous J Optom Artificial Intelligence BACKGROUND: Retinal and optic disc images are used to assess changes in the retinal vasculature. These can be changes associated with diseases such as diabetic retinopathy and glaucoma or induced using ophthalmodynamometry to measure arterial and venous pressure. Key steps toward automating the assessment of these changes are the segmentation and classification of the veins and arteries. However, such segmentation and classification are still required to be manually labelled by experts. Such automated labelling is challenging because of the complex morphology, anatomical variations, alterations due to disease and scarcity of labelled data for algorithm development. We present a deep machine learning solution called the multiscale guided attention network for retinal artery and vein segmentation and classification (MSGANet-RAV). METHODS: MSGANet-RAV was developed and tested on 383 colour clinical optic disc images from LEI-CENTRAL, constructed in-house and 40 colour fundus images from the AV-DRIVE public dataset. The datasets have a mean optic disc occupancy per image of 60.6% and 2.18%, respectively. MSGANet-RAV is a U-shaped encoder-decoder network, where the encoder extracts multiscale features, and the decoder includes a sequence of self-attention modules. The self-attention modules explore, guide and incorporate vessel-specific structural and contextual feature information to segment and classify central optic disc and retinal vessel pixels. RESULTS: MSGANet-RAV achieved a pixel classification accuracy of 93.15%, sensitivity of 92.19%, and specificity of 94.13% on LEI-CENTRAL, outperforming several reference models. It similarly performed highly on AV-DRIVE with an accuracy, sensitivity and specificity of 95.48%, 93.59% and 97.27%, respectively. CONCLUSION: The results show the efficacy of MSGANet-RAV for identifying central optic disc and retinal arteries and veins. The method can be used in automated systems designed to assess vascular changes in retinal and optic disc images quantitatively. Elsevier 2022 2022-11-14 /pmc/articles/PMC9732479/ /pubmed/36396540 http://dx.doi.org/10.1016/j.optom.2022.11.001 Text en © 2022 Spanish General Council of Optometry. Published by Elsevier España, S.L.U. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Artificial Intelligence
Chowdhury, A Z M Ehtesham
Mann, Graham
Morgan, William Huxley
Vukmirovic, Aleksandar
Mehnert, Andrew
Sohel, Ferdous
MSGANet-RAV: A multiscale guided attention network for artery-vein segmentation and classification from optic disc and retinal images
title MSGANet-RAV: A multiscale guided attention network for artery-vein segmentation and classification from optic disc and retinal images
title_full MSGANet-RAV: A multiscale guided attention network for artery-vein segmentation and classification from optic disc and retinal images
title_fullStr MSGANet-RAV: A multiscale guided attention network for artery-vein segmentation and classification from optic disc and retinal images
title_full_unstemmed MSGANet-RAV: A multiscale guided attention network for artery-vein segmentation and classification from optic disc and retinal images
title_short MSGANet-RAV: A multiscale guided attention network for artery-vein segmentation and classification from optic disc and retinal images
title_sort msganet-rav: a multiscale guided attention network for artery-vein segmentation and classification from optic disc and retinal images
topic Artificial Intelligence
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9732479/
https://www.ncbi.nlm.nih.gov/pubmed/36396540
http://dx.doi.org/10.1016/j.optom.2022.11.001
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