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Deep learning tomographic reconstruction through hierarchical decomposition of domain transforms

Deep learning (DL) has shown unprecedented performance for many image analysis and image enhancement tasks. Yet, solving large-scale inverse problems like tomographic reconstruction remains challenging for DL. These problems involve non-local and space-variant integral transforms between the input a...

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Autores principales: Fu, Lin, De Man, Bruno
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Nature Singapore 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9733764/
https://www.ncbi.nlm.nih.gov/pubmed/36484980
http://dx.doi.org/10.1186/s42492-022-00127-y
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author Fu, Lin
De Man, Bruno
author_facet Fu, Lin
De Man, Bruno
author_sort Fu, Lin
collection PubMed
description Deep learning (DL) has shown unprecedented performance for many image analysis and image enhancement tasks. Yet, solving large-scale inverse problems like tomographic reconstruction remains challenging for DL. These problems involve non-local and space-variant integral transforms between the input and output domains, for which no efficient neural network models are readily available. A prior attempt to solve tomographic reconstruction problems with supervised learning relied on a brute-force fully connected network and only allowed reconstruction with a 128(4) system matrix size. This cannot practically scale to realistic data sizes such as 512(4) and 512(6) for three-dimensional datasets. Here we present a novel framework to solve such problems with DL by casting the original problem as a continuum of intermediate representations between the input and output domains. The original problem is broken down into a sequence of simpler transformations that can be well mapped onto an efficient hierarchical network architecture, with exponentially fewer parameters than a fully connected network would need. We applied the approach to computed tomography (CT) image reconstruction for a 512(4) system matrix size. This work introduces a new kind of data-driven DL solver for full-size CT reconstruction without relying on the structure of direct (analytical) or iterative (numerical) inversion techniques. This work presents a feasibility demonstration of full-scale learnt reconstruction, whereas more developments will be needed to demonstrate superiority relative to traditional reconstruction approaches. The proposed approach is also extendable to other imaging problems such as emission and magnetic resonance reconstruction. More broadly, hierarchical DL opens the door to a new class of solvers for general inverse problems, which could potentially lead to improved signal-to-noise ratio, spatial resolution and computational efficiency in various areas.
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spelling pubmed-97337642022-12-10 Deep learning tomographic reconstruction through hierarchical decomposition of domain transforms Fu, Lin De Man, Bruno Vis Comput Ind Biomed Art Original Article Deep learning (DL) has shown unprecedented performance for many image analysis and image enhancement tasks. Yet, solving large-scale inverse problems like tomographic reconstruction remains challenging for DL. These problems involve non-local and space-variant integral transforms between the input and output domains, for which no efficient neural network models are readily available. A prior attempt to solve tomographic reconstruction problems with supervised learning relied on a brute-force fully connected network and only allowed reconstruction with a 128(4) system matrix size. This cannot practically scale to realistic data sizes such as 512(4) and 512(6) for three-dimensional datasets. Here we present a novel framework to solve such problems with DL by casting the original problem as a continuum of intermediate representations between the input and output domains. The original problem is broken down into a sequence of simpler transformations that can be well mapped onto an efficient hierarchical network architecture, with exponentially fewer parameters than a fully connected network would need. We applied the approach to computed tomography (CT) image reconstruction for a 512(4) system matrix size. This work introduces a new kind of data-driven DL solver for full-size CT reconstruction without relying on the structure of direct (analytical) or iterative (numerical) inversion techniques. This work presents a feasibility demonstration of full-scale learnt reconstruction, whereas more developments will be needed to demonstrate superiority relative to traditional reconstruction approaches. The proposed approach is also extendable to other imaging problems such as emission and magnetic resonance reconstruction. More broadly, hierarchical DL opens the door to a new class of solvers for general inverse problems, which could potentially lead to improved signal-to-noise ratio, spatial resolution and computational efficiency in various areas. Springer Nature Singapore 2022-12-09 /pmc/articles/PMC9733764/ /pubmed/36484980 http://dx.doi.org/10.1186/s42492-022-00127-y Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Original Article
Fu, Lin
De Man, Bruno
Deep learning tomographic reconstruction through hierarchical decomposition of domain transforms
title Deep learning tomographic reconstruction through hierarchical decomposition of domain transforms
title_full Deep learning tomographic reconstruction through hierarchical decomposition of domain transforms
title_fullStr Deep learning tomographic reconstruction through hierarchical decomposition of domain transforms
title_full_unstemmed Deep learning tomographic reconstruction through hierarchical decomposition of domain transforms
title_short Deep learning tomographic reconstruction through hierarchical decomposition of domain transforms
title_sort deep learning tomographic reconstruction through hierarchical decomposition of domain transforms
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9733764/
https://www.ncbi.nlm.nih.gov/pubmed/36484980
http://dx.doi.org/10.1186/s42492-022-00127-y
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