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Sampling effects and measurement overlap can bias the inference of neuronal avalanches
To date, it is still impossible to sample the entire mammalian brain with single-neuron precision. This forces one to either use spikes (focusing on few neurons) or to use coarse-sampled activity (averaging over many neurons, e.g. LFP). Naturally, the sampling technique impacts inference about colle...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9733887/ https://www.ncbi.nlm.nih.gov/pubmed/36445932 http://dx.doi.org/10.1371/journal.pcbi.1010678 |
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author | Neto, Joao Pinheiro Spitzner, F. Paul Priesemann, Viola |
author_facet | Neto, Joao Pinheiro Spitzner, F. Paul Priesemann, Viola |
author_sort | Neto, Joao Pinheiro |
collection | PubMed |
description | To date, it is still impossible to sample the entire mammalian brain with single-neuron precision. This forces one to either use spikes (focusing on few neurons) or to use coarse-sampled activity (averaging over many neurons, e.g. LFP). Naturally, the sampling technique impacts inference about collective properties. Here, we emulate both sampling techniques on a simple spiking model to quantify how they alter observed correlations and signatures of criticality. We describe a general effect: when the inter-electrode distance is small, electrodes sample overlapping regions in space, which increases the correlation between the signals. For coarse-sampled activity, this can produce power-law distributions even for non-critical systems. In contrast, spike recordings do not suffer this particular bias and underlying dynamics can be identified. This may resolve why coarse measures and spikes have produced contradicting results in the past. |
format | Online Article Text |
id | pubmed-9733887 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-97338872022-12-10 Sampling effects and measurement overlap can bias the inference of neuronal avalanches Neto, Joao Pinheiro Spitzner, F. Paul Priesemann, Viola PLoS Comput Biol Research Article To date, it is still impossible to sample the entire mammalian brain with single-neuron precision. This forces one to either use spikes (focusing on few neurons) or to use coarse-sampled activity (averaging over many neurons, e.g. LFP). Naturally, the sampling technique impacts inference about collective properties. Here, we emulate both sampling techniques on a simple spiking model to quantify how they alter observed correlations and signatures of criticality. We describe a general effect: when the inter-electrode distance is small, electrodes sample overlapping regions in space, which increases the correlation between the signals. For coarse-sampled activity, this can produce power-law distributions even for non-critical systems. In contrast, spike recordings do not suffer this particular bias and underlying dynamics can be identified. This may resolve why coarse measures and spikes have produced contradicting results in the past. Public Library of Science 2022-11-29 /pmc/articles/PMC9733887/ /pubmed/36445932 http://dx.doi.org/10.1371/journal.pcbi.1010678 Text en © 2022 Pinheiro Neto et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Neto, Joao Pinheiro Spitzner, F. Paul Priesemann, Viola Sampling effects and measurement overlap can bias the inference of neuronal avalanches |
title | Sampling effects and measurement overlap can bias the inference of neuronal avalanches |
title_full | Sampling effects and measurement overlap can bias the inference of neuronal avalanches |
title_fullStr | Sampling effects and measurement overlap can bias the inference of neuronal avalanches |
title_full_unstemmed | Sampling effects and measurement overlap can bias the inference of neuronal avalanches |
title_short | Sampling effects and measurement overlap can bias the inference of neuronal avalanches |
title_sort | sampling effects and measurement overlap can bias the inference of neuronal avalanches |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9733887/ https://www.ncbi.nlm.nih.gov/pubmed/36445932 http://dx.doi.org/10.1371/journal.pcbi.1010678 |
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