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Comprehensive pan-cancer genomic landscape of KRAS altered cancers and real-world outcomes in solid tumors
Recent clinical development of KRAS inhibitors has heightened interest in the genomic landscape of KRAS-altered cancers. We performed a pan-cancer analysis of KRAS-altered samples from 426,706 adult patients with solid or hematologic malignancies using comprehensive genomic profiling; additional ana...
Autores principales: | , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9734185/ https://www.ncbi.nlm.nih.gov/pubmed/36494601 http://dx.doi.org/10.1038/s41698-022-00334-z |
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author | Lee, Jessica K. Sivakumar, Smruthy Schrock, Alexa B. Madison, Russell Fabrizio, David Gjoerup, Ole Ross, Jeffrey S. Frampton, Garrett M. Napalkov, Pavel Montesion, Meagan Schutzman, Jennifer L. Ye, Xin Hegde, Priti S. Nagasaka, Misako Oxnard, Geoffrey R. Sokol, Ethan S. Ou, Sai-Hong Ignatius Shi, Zhen |
author_facet | Lee, Jessica K. Sivakumar, Smruthy Schrock, Alexa B. Madison, Russell Fabrizio, David Gjoerup, Ole Ross, Jeffrey S. Frampton, Garrett M. Napalkov, Pavel Montesion, Meagan Schutzman, Jennifer L. Ye, Xin Hegde, Priti S. Nagasaka, Misako Oxnard, Geoffrey R. Sokol, Ethan S. Ou, Sai-Hong Ignatius Shi, Zhen |
author_sort | Lee, Jessica K. |
collection | PubMed |
description | Recent clinical development of KRAS inhibitors has heightened interest in the genomic landscape of KRAS-altered cancers. We performed a pan-cancer analysis of KRAS-altered samples from 426,706 adult patients with solid or hematologic malignancies using comprehensive genomic profiling; additional analyses included 62,369 liquid biopsy and 7241 pediatric samples. 23% of adult pan-cancer samples had KRAS alterations; 88% were mutations, most commonly G12D/G12V/G12C/G13D/G12R, and prevalence was similar in liquid biopsies. Co-alteration landscapes were largely similar across KRAS mutations but distinct from KRAS wild-type, though differences were observed in some tumor types for tumor mutational burden, PD-L1 expression, microsatellite instability, and other mutational signatures. Prognosis of KRAS-mutant versus other genomic cohorts of lung, pancreatic, and colorectal cancer were assessed using a real-world clinicogenomic database. As specific KRAS inhibitors and combination therapeutic strategies are being developed, genomic profiling to understand co-alterations and other biomarkers that may modulate response to targeted or immunotherapies will be imperative. |
format | Online Article Text |
id | pubmed-9734185 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-97341852022-12-11 Comprehensive pan-cancer genomic landscape of KRAS altered cancers and real-world outcomes in solid tumors Lee, Jessica K. Sivakumar, Smruthy Schrock, Alexa B. Madison, Russell Fabrizio, David Gjoerup, Ole Ross, Jeffrey S. Frampton, Garrett M. Napalkov, Pavel Montesion, Meagan Schutzman, Jennifer L. Ye, Xin Hegde, Priti S. Nagasaka, Misako Oxnard, Geoffrey R. Sokol, Ethan S. Ou, Sai-Hong Ignatius Shi, Zhen NPJ Precis Oncol Article Recent clinical development of KRAS inhibitors has heightened interest in the genomic landscape of KRAS-altered cancers. We performed a pan-cancer analysis of KRAS-altered samples from 426,706 adult patients with solid or hematologic malignancies using comprehensive genomic profiling; additional analyses included 62,369 liquid biopsy and 7241 pediatric samples. 23% of adult pan-cancer samples had KRAS alterations; 88% were mutations, most commonly G12D/G12V/G12C/G13D/G12R, and prevalence was similar in liquid biopsies. Co-alteration landscapes were largely similar across KRAS mutations but distinct from KRAS wild-type, though differences were observed in some tumor types for tumor mutational burden, PD-L1 expression, microsatellite instability, and other mutational signatures. Prognosis of KRAS-mutant versus other genomic cohorts of lung, pancreatic, and colorectal cancer were assessed using a real-world clinicogenomic database. As specific KRAS inhibitors and combination therapeutic strategies are being developed, genomic profiling to understand co-alterations and other biomarkers that may modulate response to targeted or immunotherapies will be imperative. Nature Publishing Group UK 2022-12-09 /pmc/articles/PMC9734185/ /pubmed/36494601 http://dx.doi.org/10.1038/s41698-022-00334-z Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Lee, Jessica K. Sivakumar, Smruthy Schrock, Alexa B. Madison, Russell Fabrizio, David Gjoerup, Ole Ross, Jeffrey S. Frampton, Garrett M. Napalkov, Pavel Montesion, Meagan Schutzman, Jennifer L. Ye, Xin Hegde, Priti S. Nagasaka, Misako Oxnard, Geoffrey R. Sokol, Ethan S. Ou, Sai-Hong Ignatius Shi, Zhen Comprehensive pan-cancer genomic landscape of KRAS altered cancers and real-world outcomes in solid tumors |
title | Comprehensive pan-cancer genomic landscape of KRAS altered cancers and real-world outcomes in solid tumors |
title_full | Comprehensive pan-cancer genomic landscape of KRAS altered cancers and real-world outcomes in solid tumors |
title_fullStr | Comprehensive pan-cancer genomic landscape of KRAS altered cancers and real-world outcomes in solid tumors |
title_full_unstemmed | Comprehensive pan-cancer genomic landscape of KRAS altered cancers and real-world outcomes in solid tumors |
title_short | Comprehensive pan-cancer genomic landscape of KRAS altered cancers and real-world outcomes in solid tumors |
title_sort | comprehensive pan-cancer genomic landscape of kras altered cancers and real-world outcomes in solid tumors |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9734185/ https://www.ncbi.nlm.nih.gov/pubmed/36494601 http://dx.doi.org/10.1038/s41698-022-00334-z |
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