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DNA Barcoding and Morphometry Reveal Further Cryptic Bio-Diversity within the Pin Nematode Genus Paratylenchus (Nematoda: Tylenchulidae) †

Paratylenchus species are obligate ectoparasitic nematodes on cultivated and wild herbaceous and woody plants occupying numerous soil categories. Several species may cause damage to several crops (viz. P. dianthus, P. enigmaticus, P. microdorus, P. hamatus and P. epacris on carnation, lettuce, rose...

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Autores principales: Palomares-Rius, Juan Emilio, Archidona-Yuste, Antonio, Clavero-Camacho, Ilenia, de la Fuente, José A. Carreira, Rey, Ana, Viñegla, Benjamín, Liébanas, Gracia, Cantalapiedra-Navarrete, Carolina, Castillo, Pablo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9735703/
https://www.ncbi.nlm.nih.gov/pubmed/36501423
http://dx.doi.org/10.3390/plants11233385
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author Palomares-Rius, Juan Emilio
Archidona-Yuste, Antonio
Clavero-Camacho, Ilenia
de la Fuente, José A. Carreira
Rey, Ana
Viñegla, Benjamín
Liébanas, Gracia
Cantalapiedra-Navarrete, Carolina
Castillo, Pablo
author_facet Palomares-Rius, Juan Emilio
Archidona-Yuste, Antonio
Clavero-Camacho, Ilenia
de la Fuente, José A. Carreira
Rey, Ana
Viñegla, Benjamín
Liébanas, Gracia
Cantalapiedra-Navarrete, Carolina
Castillo, Pablo
author_sort Palomares-Rius, Juan Emilio
collection PubMed
description Paratylenchus species are obligate ectoparasitic nematodes on cultivated and wild herbaceous and woody plants occupying numerous soil categories. Several species may cause damage to several crops (viz. P. dianthus, P. enigmaticus, P. microdorus, P. hamatus and P. epacris on carnation, lettuce, rose and walnut, respectively). This investigation proves and emphasizes the relevance of applying integrative taxonomy for the accurate detection of Paratylenchus species in mountainous wild environments in the Malaga province, Southern Spain. This research analyzed 45 soil samples of maritimus pine and one of green heather in southern Spain and identified fourteen Paratylenchus species, two of them are described herein as new species (P. paraaonli sp. nov., P. plesiostraeleni sp. nov.), six of them were first reports for Spain (P. canchicus, P. nainianus, P. neonanus, P. salubris, Paratylenchus sp. 2 SAS, and P. wuae), and six species (P. caravaquenus, P. microdorus, P. nanus, P. neoamblycephalus, P. sheri, and P. variabilis) have been already reported in Spain. Accordingly, these data increase the biodiversity of pin nematodes in Spain comprising a total of 47 species (33.1% out of 142 total species of this genus). Phylogenetic analyses based on ribosomal and mitochondrial markers (D2-D3, ITS, and partial COI) resulted in a consistent position for the newly described Paratylenchus species in this study (P. plesiostraeleni sp. nov., P. paraaonli sp. nov.). Paratylenchus plesiostraeleni sp. nov. grouped in a separated subclade as unequivocal species from the P. straeleni-complex species (including P. straeleni and P. parastraeleni), and P. paraaonli sp. nov. clustered with P. vitecus, but clearly separate from this species. This study indicates that Paratylenchus species diversity in natural environments may be higher than expected, and this study may help in accurate identifications.
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spelling pubmed-97357032022-12-11 DNA Barcoding and Morphometry Reveal Further Cryptic Bio-Diversity within the Pin Nematode Genus Paratylenchus (Nematoda: Tylenchulidae) † Palomares-Rius, Juan Emilio Archidona-Yuste, Antonio Clavero-Camacho, Ilenia de la Fuente, José A. Carreira Rey, Ana Viñegla, Benjamín Liébanas, Gracia Cantalapiedra-Navarrete, Carolina Castillo, Pablo Plants (Basel) Article Paratylenchus species are obligate ectoparasitic nematodes on cultivated and wild herbaceous and woody plants occupying numerous soil categories. Several species may cause damage to several crops (viz. P. dianthus, P. enigmaticus, P. microdorus, P. hamatus and P. epacris on carnation, lettuce, rose and walnut, respectively). This investigation proves and emphasizes the relevance of applying integrative taxonomy for the accurate detection of Paratylenchus species in mountainous wild environments in the Malaga province, Southern Spain. This research analyzed 45 soil samples of maritimus pine and one of green heather in southern Spain and identified fourteen Paratylenchus species, two of them are described herein as new species (P. paraaonli sp. nov., P. plesiostraeleni sp. nov.), six of them were first reports for Spain (P. canchicus, P. nainianus, P. neonanus, P. salubris, Paratylenchus sp. 2 SAS, and P. wuae), and six species (P. caravaquenus, P. microdorus, P. nanus, P. neoamblycephalus, P. sheri, and P. variabilis) have been already reported in Spain. Accordingly, these data increase the biodiversity of pin nematodes in Spain comprising a total of 47 species (33.1% out of 142 total species of this genus). Phylogenetic analyses based on ribosomal and mitochondrial markers (D2-D3, ITS, and partial COI) resulted in a consistent position for the newly described Paratylenchus species in this study (P. plesiostraeleni sp. nov., P. paraaonli sp. nov.). Paratylenchus plesiostraeleni sp. nov. grouped in a separated subclade as unequivocal species from the P. straeleni-complex species (including P. straeleni and P. parastraeleni), and P. paraaonli sp. nov. clustered with P. vitecus, but clearly separate from this species. This study indicates that Paratylenchus species diversity in natural environments may be higher than expected, and this study may help in accurate identifications. MDPI 2022-12-05 /pmc/articles/PMC9735703/ /pubmed/36501423 http://dx.doi.org/10.3390/plants11233385 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Palomares-Rius, Juan Emilio
Archidona-Yuste, Antonio
Clavero-Camacho, Ilenia
de la Fuente, José A. Carreira
Rey, Ana
Viñegla, Benjamín
Liébanas, Gracia
Cantalapiedra-Navarrete, Carolina
Castillo, Pablo
DNA Barcoding and Morphometry Reveal Further Cryptic Bio-Diversity within the Pin Nematode Genus Paratylenchus (Nematoda: Tylenchulidae) †
title DNA Barcoding and Morphometry Reveal Further Cryptic Bio-Diversity within the Pin Nematode Genus Paratylenchus (Nematoda: Tylenchulidae) †
title_full DNA Barcoding and Morphometry Reveal Further Cryptic Bio-Diversity within the Pin Nematode Genus Paratylenchus (Nematoda: Tylenchulidae) †
title_fullStr DNA Barcoding and Morphometry Reveal Further Cryptic Bio-Diversity within the Pin Nematode Genus Paratylenchus (Nematoda: Tylenchulidae) †
title_full_unstemmed DNA Barcoding and Morphometry Reveal Further Cryptic Bio-Diversity within the Pin Nematode Genus Paratylenchus (Nematoda: Tylenchulidae) †
title_short DNA Barcoding and Morphometry Reveal Further Cryptic Bio-Diversity within the Pin Nematode Genus Paratylenchus (Nematoda: Tylenchulidae) †
title_sort dna barcoding and morphometry reveal further cryptic bio-diversity within the pin nematode genus paratylenchus (nematoda: tylenchulidae) †
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9735703/
https://www.ncbi.nlm.nih.gov/pubmed/36501423
http://dx.doi.org/10.3390/plants11233385
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