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Association between Synonymous SNPs of SOX10 and Plumage Color and Reproductive Traits of Ducks

SIMPLE SUMMARY: A total of six novel SNPs were found from 11 identified SNPs in the duck SOX10 gene. Three of them were associated with reproductive traits, whereas two were associated with plumage color. ABSTRACT: Mutations in the SOX10 gene affect the plumage color of chickens and pigeons. The mut...

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Autores principales: Sarjana, Teysar Adi, Zhang, Gongyan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9736065/
https://www.ncbi.nlm.nih.gov/pubmed/36496864
http://dx.doi.org/10.3390/ani12233345
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author Sarjana, Teysar Adi
Zhang, Gongyan
author_facet Sarjana, Teysar Adi
Zhang, Gongyan
author_sort Sarjana, Teysar Adi
collection PubMed
description SIMPLE SUMMARY: A total of six novel SNPs were found from 11 identified SNPs in the duck SOX10 gene. Three of them were associated with reproductive traits, whereas two were associated with plumage color. ABSTRACT: Mutations in the SOX10 gene affect the plumage color of chickens and pigeons. The mutation also causes abnormal pigmentation of the skin and hair color, as well as postnatal growth retardation and reproduction problems in humans and mice. In this study, we investigated the association between the SOX10 gene and plumage color and reproductive traits of ducks using SNPs. We found six novel SNPs from 11 identified SNP sites using direct sequencing for PCR products from three different mixed DNA pools. We found two coding SNPs to be associated with the plumage color of ducks (ZJU1.0 Chr1. g.54065419C>T and g.54070844C>T), and found three coding SNPs associated with the reproductive traits of ducks (g.54065419C>T, g.54070844C>T, and g.54070904C>T), which were age at sexual maturity, body weight at sexual maturity, and the Haugh unit for egg quality traits and egg production in different productive periods. These results also indicated that the T alleles of the three SNPs of the coding region of SOX10 contribute to lower reproductive traits.
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spelling pubmed-97360652022-12-11 Association between Synonymous SNPs of SOX10 and Plumage Color and Reproductive Traits of Ducks Sarjana, Teysar Adi Zhang, Gongyan Animals (Basel) Article SIMPLE SUMMARY: A total of six novel SNPs were found from 11 identified SNPs in the duck SOX10 gene. Three of them were associated with reproductive traits, whereas two were associated with plumage color. ABSTRACT: Mutations in the SOX10 gene affect the plumage color of chickens and pigeons. The mutation also causes abnormal pigmentation of the skin and hair color, as well as postnatal growth retardation and reproduction problems in humans and mice. In this study, we investigated the association between the SOX10 gene and plumage color and reproductive traits of ducks using SNPs. We found six novel SNPs from 11 identified SNP sites using direct sequencing for PCR products from three different mixed DNA pools. We found two coding SNPs to be associated with the plumage color of ducks (ZJU1.0 Chr1. g.54065419C>T and g.54070844C>T), and found three coding SNPs associated with the reproductive traits of ducks (g.54065419C>T, g.54070844C>T, and g.54070904C>T), which were age at sexual maturity, body weight at sexual maturity, and the Haugh unit for egg quality traits and egg production in different productive periods. These results also indicated that the T alleles of the three SNPs of the coding region of SOX10 contribute to lower reproductive traits. MDPI 2022-11-29 /pmc/articles/PMC9736065/ /pubmed/36496864 http://dx.doi.org/10.3390/ani12233345 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Sarjana, Teysar Adi
Zhang, Gongyan
Association between Synonymous SNPs of SOX10 and Plumage Color and Reproductive Traits of Ducks
title Association between Synonymous SNPs of SOX10 and Plumage Color and Reproductive Traits of Ducks
title_full Association between Synonymous SNPs of SOX10 and Plumage Color and Reproductive Traits of Ducks
title_fullStr Association between Synonymous SNPs of SOX10 and Plumage Color and Reproductive Traits of Ducks
title_full_unstemmed Association between Synonymous SNPs of SOX10 and Plumage Color and Reproductive Traits of Ducks
title_short Association between Synonymous SNPs of SOX10 and Plumage Color and Reproductive Traits of Ducks
title_sort association between synonymous snps of sox10 and plumage color and reproductive traits of ducks
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9736065/
https://www.ncbi.nlm.nih.gov/pubmed/36496864
http://dx.doi.org/10.3390/ani12233345
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