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Rapid Detection of Porcine DNA in Meatball Using Recombinase Polymerase Amplification Couple with Lateral Flow Immunoassay for Halal Authentication

Point-of-care diagnostic methods for animal species determination are critical for rapid, simple, and accurate enforcement of food labelling. PCR is the most common method for species identification. However, the requirement of using a thermal cycler created drawbacks for the PCR application, partic...

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Autores principales: Yusop, Mohd Hazim Mohd, Bakar, Mohd Fadzelly Abu, Kamarudin, Kamarul Rahim, Mokhtar, Nur Fadhilah Khairil, Hossain, Mohd Abd Motalib, Johan, Mohd Rafie, Noor, Nor Qhairul Izzreen Mohd
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9736299/
https://www.ncbi.nlm.nih.gov/pubmed/36500215
http://dx.doi.org/10.3390/molecules27238122
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author Yusop, Mohd Hazim Mohd
Bakar, Mohd Fadzelly Abu
Kamarudin, Kamarul Rahim
Mokhtar, Nur Fadhilah Khairil
Hossain, Mohd Abd Motalib
Johan, Mohd Rafie
Noor, Nor Qhairul Izzreen Mohd
author_facet Yusop, Mohd Hazim Mohd
Bakar, Mohd Fadzelly Abu
Kamarudin, Kamarul Rahim
Mokhtar, Nur Fadhilah Khairil
Hossain, Mohd Abd Motalib
Johan, Mohd Rafie
Noor, Nor Qhairul Izzreen Mohd
author_sort Yusop, Mohd Hazim Mohd
collection PubMed
description Point-of-care diagnostic methods for animal species determination are critical for rapid, simple, and accurate enforcement of food labelling. PCR is the most common method for species identification. However, the requirement of using a thermal cycler created drawbacks for the PCR application, particularly in low-resource settings. Hence, in this study, a method for porcine DNA detection using recombinase polymerase amplification (RPA), coupled with nucleic acid lateral flow immunoassay (NALFIA), was developed. Porcine-specific primers targeting pig (Sus scrofa) cytochrome b gene fragments specifically amplify a 197 bp fragment of the mitochondrial gene as being visualized by 2% agarose gel and PCRD NALFIA. The reaction temperature and time were 39 °C and 20 min, respectively. Herein, the specificity of the primers to porcine was confirmed after being assayed against six animal species, namely cow, goat, chicken, duck, dog, and rabbit. The porcine-specific RPA assay shows a high limit of detection of 0.01 ng/µL pork DNA. Based on the preliminary performance data obtained from this study, the potential of this method as a rapid and sensitive tool for porcine DNA detection in meat-based products is foreseen.
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spelling pubmed-97362992022-12-11 Rapid Detection of Porcine DNA in Meatball Using Recombinase Polymerase Amplification Couple with Lateral Flow Immunoassay for Halal Authentication Yusop, Mohd Hazim Mohd Bakar, Mohd Fadzelly Abu Kamarudin, Kamarul Rahim Mokhtar, Nur Fadhilah Khairil Hossain, Mohd Abd Motalib Johan, Mohd Rafie Noor, Nor Qhairul Izzreen Mohd Molecules Article Point-of-care diagnostic methods for animal species determination are critical for rapid, simple, and accurate enforcement of food labelling. PCR is the most common method for species identification. However, the requirement of using a thermal cycler created drawbacks for the PCR application, particularly in low-resource settings. Hence, in this study, a method for porcine DNA detection using recombinase polymerase amplification (RPA), coupled with nucleic acid lateral flow immunoassay (NALFIA), was developed. Porcine-specific primers targeting pig (Sus scrofa) cytochrome b gene fragments specifically amplify a 197 bp fragment of the mitochondrial gene as being visualized by 2% agarose gel and PCRD NALFIA. The reaction temperature and time were 39 °C and 20 min, respectively. Herein, the specificity of the primers to porcine was confirmed after being assayed against six animal species, namely cow, goat, chicken, duck, dog, and rabbit. The porcine-specific RPA assay shows a high limit of detection of 0.01 ng/µL pork DNA. Based on the preliminary performance data obtained from this study, the potential of this method as a rapid and sensitive tool for porcine DNA detection in meat-based products is foreseen. MDPI 2022-11-22 /pmc/articles/PMC9736299/ /pubmed/36500215 http://dx.doi.org/10.3390/molecules27238122 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Yusop, Mohd Hazim Mohd
Bakar, Mohd Fadzelly Abu
Kamarudin, Kamarul Rahim
Mokhtar, Nur Fadhilah Khairil
Hossain, Mohd Abd Motalib
Johan, Mohd Rafie
Noor, Nor Qhairul Izzreen Mohd
Rapid Detection of Porcine DNA in Meatball Using Recombinase Polymerase Amplification Couple with Lateral Flow Immunoassay for Halal Authentication
title Rapid Detection of Porcine DNA in Meatball Using Recombinase Polymerase Amplification Couple with Lateral Flow Immunoassay for Halal Authentication
title_full Rapid Detection of Porcine DNA in Meatball Using Recombinase Polymerase Amplification Couple with Lateral Flow Immunoassay for Halal Authentication
title_fullStr Rapid Detection of Porcine DNA in Meatball Using Recombinase Polymerase Amplification Couple with Lateral Flow Immunoassay for Halal Authentication
title_full_unstemmed Rapid Detection of Porcine DNA in Meatball Using Recombinase Polymerase Amplification Couple with Lateral Flow Immunoassay for Halal Authentication
title_short Rapid Detection of Porcine DNA in Meatball Using Recombinase Polymerase Amplification Couple with Lateral Flow Immunoassay for Halal Authentication
title_sort rapid detection of porcine dna in meatball using recombinase polymerase amplification couple with lateral flow immunoassay for halal authentication
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9736299/
https://www.ncbi.nlm.nih.gov/pubmed/36500215
http://dx.doi.org/10.3390/molecules27238122
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