Cargando…

Meta-Analysis of RNA-Seq Datasets Identifies Novel Players in Glioblastoma

SIMPLE SUMMARY: Glioblastoma is a grade IV glioma of heterogeneous nature, which complicates disease pathophysiology and biomarker research. The aim of this meta-analysis was to identify long non-coding RNAs (lncRNAs) and protein-coding genes (PCGs) that are differentially expressed in glioblastoma....

Descripción completa

Detalles Bibliográficos
Autores principales:	Sallam, Magy, Mysara, Mohamed, Baatout, Sarah, Guns, Pieter-Jan, Ramadan, Raghda, Benotmane, Mohammed Abderrafi
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	MDPI 2022
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9737249/ https://www.ncbi.nlm.nih.gov/pubmed/36497269 http://dx.doi.org/10.3390/cancers14235788

Ejemplares similares

Radiation-induced cardiovascular disease: an overlooked role for DNA methylation?
por: Sallam, Magy, et al.
Publicado: (2021)

DNA Methylation Alterations in Fractionally Irradiated Rats and Breast Cancer Patients Receiving Radiotherapy
por: Sallam, Magy, et al.
Publicado: (2022)

Cardiovascular diseases related to ionizing radiation: The risk of low-dose exposure (Review)
por: Baselet, Bjorn, et al.
Publicado: (2016)

Single and fractionated ionizing radiation induce alterations in endothelial connexin expression and channel function
por: Ramadan, Raghda, et al.
Publicado: (2019)

X-irradiation induces acute and early term inflammatory responses in atherosclerosis-prone ApoE(−)/(−) mice and in endothelial cells
por: Ramadan, Raghda, et al.
Publicado: (2021)

Non-conventional apoptotic response to ionising radiation mediated by N-methyl D-aspartate receptors in immature neuronal cells
por: SAMARI, NADA, et al.
Publicado: (2013)

A systems radiation biology approach to unravel the role of chronic low-dose-rate gamma-irradiation in inducing premature senescence in endothelial cells
por: Babini, Gabriele, et al.
Publicado: (2022)

Combined Exposure to Simulated Microgravity and Acute or Chronic Radiation Reduces Neuronal Network Integrity and Survival
por: Pani, Giuseppe, et al.
Publicado: (2016)

Morphological and Physiological Changes in Mature In Vitro Neuronal Networks towards Exposure to Short-, Middle- or Long-Term Simulated Microgravity
por: Pani, Giuseppe, et al.
Publicado: (2013)

The role of connexin proteins and their channels in radiation-induced atherosclerosis
por: Ramadan, Raghda, et al.
Publicado: (2021)

Correction to: The role of connexin proteins and their channels in radiation-induced atherosclerosis
por: Ramadan, Raghda, et al.
Publicado: (2021)

From reads to operational taxonomic units: an ensemble processing pipeline for MiSeq amplicon sequencing data
por: Mysara, Mohamed, et al.
Publicado: (2017)

IPED: a highly efficient denoising tool for Illumina MiSeq Paired-end 16S rRNA gene amplicon sequencing data
por: Mysara, Mohamed, et al.
Publicado: (2016)

Folic Acid Fortification Prevents Morphological and Behavioral Consequences of X-Ray Exposure During Neurulation
por: Craenen, Kai, et al.
Publicado: (2021)

Meta-analysis of lean and obese RNA-seq datasets to identify genes targeting obesity
por: Prabhakar, Lavanya, et al.
Publicado: (2023)

Current Evidence for Developmental, Structural, and Functional Brain Defects following Prenatal Radiation Exposure
por: Verreet, Tine, et al.
Publicado: (2016)

Integrated analysis of single‐cell RNA‐seq dataset and bulk RNA‐seq dataset constructs a prognostic model for predicting survival in human glioblastoma
por: Lai, Wenwen, et al.
Publicado: (2022)

Fugacium Spliced Leader Genes Identified from Stranded RNA-Seq Datasets
por: Song, Yue, et al.
Publicado: (2019)

Connexin43 Hemichannel Targeting With TAT-Gap19 Alleviates Radiation-Induced Endothelial Cell Damage
por: Ramadan, Raghda, et al.
Publicado: (2020)

Integration of RNA-Seq and proteomics data identifies glioblastoma multiforme surfaceome signature
por: Syafruddin, Saiful Effendi, et al.
Publicado: (2021)

Intestinal mucositis precedes dysbiosis in a mouse model for pelvic irradiation
por: Segers, Charlotte, et al.
Publicado: (2021)

Meta-Analysis of Dilated Cardiomyopathy Using Cardiac RNA-Seq Transcriptomic Datasets
por: Alimadadi, Ahmad, et al.
Publicado: (2020)

Limnospira indica PCC 8005 Supplementation Prevents Pelvic Irradiation-Induced Dysbiosis but Not Acute Inflammation in Mice
por: Segers, Charlotte, et al.
Publicado: (2023)

A multidisciplinary approach unravels early and persistent effects of X-ray exposure at the onset of prenatal neurogenesis
por: Verreet, Tine, et al.
Publicado: (2015)

Threshold-seq: a tool for determining the threshold in short RNA-seq datasets
por: Magee, Rogan, et al.
Publicado: (2017)

In silico validation of RNA-Seq results can identify gene fusions with oncogenic potential in glioblastoma
por: Hernandez, Ainhoa, et al.
Publicado: (2022)

Assessing Transcriptome Quality in Patch-Seq Datasets
por: Tripathy, Shreejoy J., et al.
Publicado: (2018)

Integrated RNA-Seq and sRNA-Seq Analysis Identifies Chilling and Freezing Responsive Key Molecular Players and Pathways in Tea Plant (Camellia sinensis)
por: Zheng, Chao, et al.
Publicado: (2015)

Identifying novel transcript biomarkers for hepatocellular carcinoma (HCC) using RNA-Seq datasets and machine learning
por: Gupta, Rajinder, et al.
Publicado: (2021)

Exposure to Ionizing Radiation Triggers Prolonged Changes in Circular RNA Abundance in the Embryonic Mouse Brain and Primary Neurons
por: Mbouombouo Mfossa, André Claude, et al.
Publicado: (2019)

Meta-Analysis of Human Cancer Single-Cell RNA-Seq Datasets Using the IMMUcan Database
por: Camps, Jordi, et al.
Publicado: (2023)

NoDe: a fast error-correction algorithm for pyrosequencing amplicon reads
por: Mysara, Mohamed, et al.
Publicado: (2015)

Radiation-induced alternative transcription and splicing events and their applicability to practical biodosimetry
por: Macaeva, Ellina, et al.
Publicado: (2016)

A multimodal MRI dataset of professional chess players
por: Li, Kaiming, et al.
Publicado: (2015)

High-sensitive spatially resolved T cell receptor sequencing with SPTCR-seq
por: Benotmane, Jasim Kada, et al.
Publicado: (2023)

Discovery of Protein–lncRNA Interactions by Integrating Large-Scale CLIP-Seq and RNA-Seq Datasets
por: Li, Jun-Hao, et al.
Publicado: (2015)

An interpretable framework for clustering single-cell RNA-Seq datasets
por: Zhang, Jesse M., et al.
Publicado: (2018)

Brain Radiation Information Data Exchange (BRIDE): integration of experimental data from low-dose ionising radiation research for pathway discovery
por: Karapiperis, Christos, et al.
Publicado: (2016)

Meta-Analysis of Two Human RNA-seq Datasets to Determine Periodontitis Diagnostic Biomarkers and Drug Target Candidates
por: Moreno, Carlos, et al.
Publicado: (2022)

The role of the ubiquitin proteasome system in glioma: analysis emphasizing the main molecular players and therapeutic strategies identified in glioblastoma multiforme.
por: Maksoud, Semer
Publicado: (2021)

Cannot write session to /tmp/vufind_sessions/sess_a5729a7098a4n9a6qa2m62bbo5