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Long Non-Coding RNAs Expressed in the Peanut Allergy for Understanding the Pathophysiology of Peanut Allergy Rat Model

Background: Peanut allergy (PA) has become a clinical and public health problem, which is mainly regulated by genetics, immune responses, and environmental factors. Diagnosis and treatment for PA have always remained huge challenges due to its multiple triggers. Studies have shown that long non-codi...

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Autores principales: Liu, Manman, Li, Sen, Li, Boya, Sun, Shanfeng, Liu, Guirong, Wang, Junjuan, Hao, Mengzhen, Che, Huilian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9740276/
https://www.ncbi.nlm.nih.gov/pubmed/36496569
http://dx.doi.org/10.3390/foods11233760
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author Liu, Manman
Li, Sen
Li, Boya
Sun, Shanfeng
Liu, Guirong
Wang, Junjuan
Hao, Mengzhen
Che, Huilian
author_facet Liu, Manman
Li, Sen
Li, Boya
Sun, Shanfeng
Liu, Guirong
Wang, Junjuan
Hao, Mengzhen
Che, Huilian
author_sort Liu, Manman
collection PubMed
description Background: Peanut allergy (PA) has become a clinical and public health problem, which is mainly regulated by genetics, immune responses, and environmental factors. Diagnosis and treatment for PA have always remained huge challenges due to its multiple triggers. Studies have shown that long non-coding RNAs (lncRNAs) play a critical role in the development of allergic diseases. Method and Results: In the current study, we examined the plasma lncRNA expression profiles of peanut allergy Brown Norway rats and healthy controls and 496 differently expressed lncRNAs were identified, including 411 up-regulated genes and 85 down-regulated genes. We screened 8 lncRNAs based on the candidate principle and the candidates were verified in individual samples by quantitative real-time PCR. Then, the four lncRNA-based diagnostic model was established by least absolute shrinkage and selection operator (LASSO) and logistic regression, which was proved by area under the receiver operating characteristic curve (AUC). Conclusions: In summary, we assessed the correlation between lncRNA expression levels and the diagnosis of peanut allergy, which may perform a vital role in guiding the management of peanut allergy.
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spelling pubmed-97402762022-12-11 Long Non-Coding RNAs Expressed in the Peanut Allergy for Understanding the Pathophysiology of Peanut Allergy Rat Model Liu, Manman Li, Sen Li, Boya Sun, Shanfeng Liu, Guirong Wang, Junjuan Hao, Mengzhen Che, Huilian Foods Article Background: Peanut allergy (PA) has become a clinical and public health problem, which is mainly regulated by genetics, immune responses, and environmental factors. Diagnosis and treatment for PA have always remained huge challenges due to its multiple triggers. Studies have shown that long non-coding RNAs (lncRNAs) play a critical role in the development of allergic diseases. Method and Results: In the current study, we examined the plasma lncRNA expression profiles of peanut allergy Brown Norway rats and healthy controls and 496 differently expressed lncRNAs were identified, including 411 up-regulated genes and 85 down-regulated genes. We screened 8 lncRNAs based on the candidate principle and the candidates were verified in individual samples by quantitative real-time PCR. Then, the four lncRNA-based diagnostic model was established by least absolute shrinkage and selection operator (LASSO) and logistic regression, which was proved by area under the receiver operating characteristic curve (AUC). Conclusions: In summary, we assessed the correlation between lncRNA expression levels and the diagnosis of peanut allergy, which may perform a vital role in guiding the management of peanut allergy. MDPI 2022-11-22 /pmc/articles/PMC9740276/ /pubmed/36496569 http://dx.doi.org/10.3390/foods11233760 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Liu, Manman
Li, Sen
Li, Boya
Sun, Shanfeng
Liu, Guirong
Wang, Junjuan
Hao, Mengzhen
Che, Huilian
Long Non-Coding RNAs Expressed in the Peanut Allergy for Understanding the Pathophysiology of Peanut Allergy Rat Model
title Long Non-Coding RNAs Expressed in the Peanut Allergy for Understanding the Pathophysiology of Peanut Allergy Rat Model
title_full Long Non-Coding RNAs Expressed in the Peanut Allergy for Understanding the Pathophysiology of Peanut Allergy Rat Model
title_fullStr Long Non-Coding RNAs Expressed in the Peanut Allergy for Understanding the Pathophysiology of Peanut Allergy Rat Model
title_full_unstemmed Long Non-Coding RNAs Expressed in the Peanut Allergy for Understanding the Pathophysiology of Peanut Allergy Rat Model
title_short Long Non-Coding RNAs Expressed in the Peanut Allergy for Understanding the Pathophysiology of Peanut Allergy Rat Model
title_sort long non-coding rnas expressed in the peanut allergy for understanding the pathophysiology of peanut allergy rat model
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9740276/
https://www.ncbi.nlm.nih.gov/pubmed/36496569
http://dx.doi.org/10.3390/foods11233760
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