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Circadian rhythm-related factors of PER and CRY family genes function as novel therapeutic targets and prognostic biomarkers in lung adenocarcinoma
The period (PER) and cryptochrome (CRY) families play critical roles in circadian rhythms. The imbalance of circadian factors may lead to the occurrence of cancer. Expressions of PER and CRY family members decrease in various cancers. Nevertheless, expression levels, genetic variations, and molecula...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9740380/ https://www.ncbi.nlm.nih.gov/pubmed/36385012 http://dx.doi.org/10.18632/aging.204386 |
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author | Wang, Chin-Chou Lin, Wei-Hsun Ku, Su-Chi Shen, Wan-Jou Ta, Hoang Dang Khoa Anuraga, Gangga Liu, Fang-Wen Shen, Chiu-Fan Wang, Shu-He Yang, Chia-Chen Wang, Chih-Yang Wang, Wei-Jan |
author_facet | Wang, Chin-Chou Lin, Wei-Hsun Ku, Su-Chi Shen, Wan-Jou Ta, Hoang Dang Khoa Anuraga, Gangga Liu, Fang-Wen Shen, Chiu-Fan Wang, Shu-He Yang, Chia-Chen Wang, Chih-Yang Wang, Wei-Jan |
author_sort | Wang, Chin-Chou |
collection | PubMed |
description | The period (PER) and cryptochrome (CRY) families play critical roles in circadian rhythms. The imbalance of circadian factors may lead to the occurrence of cancer. Expressions of PER and CRY family members decrease in various cancers. Nevertheless, expression levels, genetic variations, and molecular mechanisms of PER and CRY family members in lung adenocarcinoma (LUAD) and their correlations with prognoses and immune infiltration in LUAD patients are still unclear. In this study, to identify their biological functions in LUAD development, comprehensive high-throughput techniques were applied to analyze the relationships of expressions of PER and CRY family members with genetic variations, molecular mechanisms, and immune infiltration. The present results showed that transcription levels of PER1 and CRY2 in LUAD were significantly downregulated. High expression levels of PER2, PER3, CRY1, and CRY2 indicated longer overall survival. Some cancer signaling pathways were related to PER and CRY family members, such as cell-cycle, histidine metabolism, and progesterone-mediated oocyte maturation pathways. Expressions of PER and CRY family members significantly affected the infiltration of different immune cells. In conclusion, our findings may help better understand the molecular basis of LUAD, and provide new perspectives of PER and CRY family members as novel biomarkers for LUAD. |
format | Online Article Text |
id | pubmed-9740380 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Impact Journals |
record_format | MEDLINE/PubMed |
spelling | pubmed-97403802022-12-12 Circadian rhythm-related factors of PER and CRY family genes function as novel therapeutic targets and prognostic biomarkers in lung adenocarcinoma Wang, Chin-Chou Lin, Wei-Hsun Ku, Su-Chi Shen, Wan-Jou Ta, Hoang Dang Khoa Anuraga, Gangga Liu, Fang-Wen Shen, Chiu-Fan Wang, Shu-He Yang, Chia-Chen Wang, Chih-Yang Wang, Wei-Jan Aging (Albany NY) Research Paper The period (PER) and cryptochrome (CRY) families play critical roles in circadian rhythms. The imbalance of circadian factors may lead to the occurrence of cancer. Expressions of PER and CRY family members decrease in various cancers. Nevertheless, expression levels, genetic variations, and molecular mechanisms of PER and CRY family members in lung adenocarcinoma (LUAD) and their correlations with prognoses and immune infiltration in LUAD patients are still unclear. In this study, to identify their biological functions in LUAD development, comprehensive high-throughput techniques were applied to analyze the relationships of expressions of PER and CRY family members with genetic variations, molecular mechanisms, and immune infiltration. The present results showed that transcription levels of PER1 and CRY2 in LUAD were significantly downregulated. High expression levels of PER2, PER3, CRY1, and CRY2 indicated longer overall survival. Some cancer signaling pathways were related to PER and CRY family members, such as cell-cycle, histidine metabolism, and progesterone-mediated oocyte maturation pathways. Expressions of PER and CRY family members significantly affected the infiltration of different immune cells. In conclusion, our findings may help better understand the molecular basis of LUAD, and provide new perspectives of PER and CRY family members as novel biomarkers for LUAD. Impact Journals 2022-11-16 /pmc/articles/PMC9740380/ /pubmed/36385012 http://dx.doi.org/10.18632/aging.204386 Text en Copyright: © 2022 Wang et al. https://creativecommons.org/licenses/by/3.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper Wang, Chin-Chou Lin, Wei-Hsun Ku, Su-Chi Shen, Wan-Jou Ta, Hoang Dang Khoa Anuraga, Gangga Liu, Fang-Wen Shen, Chiu-Fan Wang, Shu-He Yang, Chia-Chen Wang, Chih-Yang Wang, Wei-Jan Circadian rhythm-related factors of PER and CRY family genes function as novel therapeutic targets and prognostic biomarkers in lung adenocarcinoma |
title | Circadian rhythm-related factors of PER and CRY family genes function as novel therapeutic targets and prognostic biomarkers in lung adenocarcinoma |
title_full | Circadian rhythm-related factors of PER and CRY family genes function as novel therapeutic targets and prognostic biomarkers in lung adenocarcinoma |
title_fullStr | Circadian rhythm-related factors of PER and CRY family genes function as novel therapeutic targets and prognostic biomarkers in lung adenocarcinoma |
title_full_unstemmed | Circadian rhythm-related factors of PER and CRY family genes function as novel therapeutic targets and prognostic biomarkers in lung adenocarcinoma |
title_short | Circadian rhythm-related factors of PER and CRY family genes function as novel therapeutic targets and prognostic biomarkers in lung adenocarcinoma |
title_sort | circadian rhythm-related factors of per and cry family genes function as novel therapeutic targets and prognostic biomarkers in lung adenocarcinoma |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9740380/ https://www.ncbi.nlm.nih.gov/pubmed/36385012 http://dx.doi.org/10.18632/aging.204386 |
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