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Systematic Comparison of Plant Promoters in Nicotiana spp. Expression Systems
We report a systematic comparison of 19 plant promoters and 20 promoter-terminator combinations in two expression systems: agroinfiltration in Nicotiana benthamiana leaves, and Nicotiana tabacum BY-2 plant cell packs. The set of promoters tested comprised those not present in previously published wo...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9740895/ https://www.ncbi.nlm.nih.gov/pubmed/36499768 http://dx.doi.org/10.3390/ijms232315441 |
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author | Shakhova, Ekaterina S. Markina, Nadezhda M. Mitiouchkina, Tatiana Bugaeva, Evgenia N. Karataeva, Tatiana A. Palkina, Kseniia A. Fakhranurova, Liliia I. Yampolsky, Ilia V. Sarkisyan, Karen S. Mishin, Alexander S. |
author_facet | Shakhova, Ekaterina S. Markina, Nadezhda M. Mitiouchkina, Tatiana Bugaeva, Evgenia N. Karataeva, Tatiana A. Palkina, Kseniia A. Fakhranurova, Liliia I. Yampolsky, Ilia V. Sarkisyan, Karen S. Mishin, Alexander S. |
author_sort | Shakhova, Ekaterina S. |
collection | PubMed |
description | We report a systematic comparison of 19 plant promoters and 20 promoter-terminator combinations in two expression systems: agroinfiltration in Nicotiana benthamiana leaves, and Nicotiana tabacum BY-2 plant cell packs. The set of promoters tested comprised those not present in previously published work, including several computationally predicted synthetic promoters validated here for the first time. The expression of EGFP driven by different promoters varied by more than two orders of magnitude and was largely consistent between two tested Nicotiana systems. We confirmed previous reports of significant modulation of expression by terminators, as well as synergistic effects of promoters and terminators. Additionally, we observed non-linear effects of gene dosage on expression level. The dataset presented here can inform the design of genetic constructs for plant engineering and transient expression assays. |
format | Online Article Text |
id | pubmed-9740895 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-97408952022-12-11 Systematic Comparison of Plant Promoters in Nicotiana spp. Expression Systems Shakhova, Ekaterina S. Markina, Nadezhda M. Mitiouchkina, Tatiana Bugaeva, Evgenia N. Karataeva, Tatiana A. Palkina, Kseniia A. Fakhranurova, Liliia I. Yampolsky, Ilia V. Sarkisyan, Karen S. Mishin, Alexander S. Int J Mol Sci Article We report a systematic comparison of 19 plant promoters and 20 promoter-terminator combinations in two expression systems: agroinfiltration in Nicotiana benthamiana leaves, and Nicotiana tabacum BY-2 plant cell packs. The set of promoters tested comprised those not present in previously published work, including several computationally predicted synthetic promoters validated here for the first time. The expression of EGFP driven by different promoters varied by more than two orders of magnitude and was largely consistent between two tested Nicotiana systems. We confirmed previous reports of significant modulation of expression by terminators, as well as synergistic effects of promoters and terminators. Additionally, we observed non-linear effects of gene dosage on expression level. The dataset presented here can inform the design of genetic constructs for plant engineering and transient expression assays. MDPI 2022-12-06 /pmc/articles/PMC9740895/ /pubmed/36499768 http://dx.doi.org/10.3390/ijms232315441 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Shakhova, Ekaterina S. Markina, Nadezhda M. Mitiouchkina, Tatiana Bugaeva, Evgenia N. Karataeva, Tatiana A. Palkina, Kseniia A. Fakhranurova, Liliia I. Yampolsky, Ilia V. Sarkisyan, Karen S. Mishin, Alexander S. Systematic Comparison of Plant Promoters in Nicotiana spp. Expression Systems |
title | Systematic Comparison of Plant Promoters in Nicotiana spp. Expression Systems |
title_full | Systematic Comparison of Plant Promoters in Nicotiana spp. Expression Systems |
title_fullStr | Systematic Comparison of Plant Promoters in Nicotiana spp. Expression Systems |
title_full_unstemmed | Systematic Comparison of Plant Promoters in Nicotiana spp. Expression Systems |
title_short | Systematic Comparison of Plant Promoters in Nicotiana spp. Expression Systems |
title_sort | systematic comparison of plant promoters in nicotiana spp. expression systems |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9740895/ https://www.ncbi.nlm.nih.gov/pubmed/36499768 http://dx.doi.org/10.3390/ijms232315441 |
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