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Thermal tuning of protein hydration in a hyperthermophilic enzyme
Water at the protein surface is an active biological molecule that plays a critical role in many functional processes. Using NMR-restrained MD simulations, we here addressed how protein hydration is tuned at high biological temperatures by analysing homologous acylphosphatase enzymes (AcP) possessin...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9742426/ https://www.ncbi.nlm.nih.gov/pubmed/36518847 http://dx.doi.org/10.3389/fmolb.2022.1037445 |
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author | Fusco, Giuliana Biancaniello, Carmen Vrettas, Michail D. De Simone, Alfonso |
author_facet | Fusco, Giuliana Biancaniello, Carmen Vrettas, Michail D. De Simone, Alfonso |
author_sort | Fusco, Giuliana |
collection | PubMed |
description | Water at the protein surface is an active biological molecule that plays a critical role in many functional processes. Using NMR-restrained MD simulations, we here addressed how protein hydration is tuned at high biological temperatures by analysing homologous acylphosphatase enzymes (AcP) possessing similar structure and dynamics under very different thermal conditions. We found that the hyperthermophilic Sso AcP at 80°C interacts with a lower number of structured waters in the first hydration shell than its human homologous mt AcP at 37°C. Overall, the structural and dynamical properties of waters at the surface of the two enzymes resulted similar in the first hydration shell, including solvent molecules residing in the active site. By contrast the dynamical content of water molecules in the second hydration shell was found to diverge, with higher mobility observed in Sso AcP at 80°C. Taken together the results delineate the subtle differences in the hydration properties of mt AcP and Sso AcP, and indicate that the concept of corresponding states with equivalent dynamics in homologous mesophilic and hyperthermophylic proteins should be extended to the first hydration shell. |
format | Online Article Text |
id | pubmed-9742426 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-97424262022-12-13 Thermal tuning of protein hydration in a hyperthermophilic enzyme Fusco, Giuliana Biancaniello, Carmen Vrettas, Michail D. De Simone, Alfonso Front Mol Biosci Molecular Biosciences Water at the protein surface is an active biological molecule that plays a critical role in many functional processes. Using NMR-restrained MD simulations, we here addressed how protein hydration is tuned at high biological temperatures by analysing homologous acylphosphatase enzymes (AcP) possessing similar structure and dynamics under very different thermal conditions. We found that the hyperthermophilic Sso AcP at 80°C interacts with a lower number of structured waters in the first hydration shell than its human homologous mt AcP at 37°C. Overall, the structural and dynamical properties of waters at the surface of the two enzymes resulted similar in the first hydration shell, including solvent molecules residing in the active site. By contrast the dynamical content of water molecules in the second hydration shell was found to diverge, with higher mobility observed in Sso AcP at 80°C. Taken together the results delineate the subtle differences in the hydration properties of mt AcP and Sso AcP, and indicate that the concept of corresponding states with equivalent dynamics in homologous mesophilic and hyperthermophylic proteins should be extended to the first hydration shell. Frontiers Media S.A. 2022-11-28 /pmc/articles/PMC9742426/ /pubmed/36518847 http://dx.doi.org/10.3389/fmolb.2022.1037445 Text en Copyright © 2022 Fusco, Biancaniello, Vrettas and De Simone. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Molecular Biosciences Fusco, Giuliana Biancaniello, Carmen Vrettas, Michail D. De Simone, Alfonso Thermal tuning of protein hydration in a hyperthermophilic enzyme |
title | Thermal tuning of protein hydration in a hyperthermophilic enzyme |
title_full | Thermal tuning of protein hydration in a hyperthermophilic enzyme |
title_fullStr | Thermal tuning of protein hydration in a hyperthermophilic enzyme |
title_full_unstemmed | Thermal tuning of protein hydration in a hyperthermophilic enzyme |
title_short | Thermal tuning of protein hydration in a hyperthermophilic enzyme |
title_sort | thermal tuning of protein hydration in a hyperthermophilic enzyme |
topic | Molecular Biosciences |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9742426/ https://www.ncbi.nlm.nih.gov/pubmed/36518847 http://dx.doi.org/10.3389/fmolb.2022.1037445 |
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