Cargando…

Thermal tuning of protein hydration in a hyperthermophilic enzyme

Water at the protein surface is an active biological molecule that plays a critical role in many functional processes. Using NMR-restrained MD simulations, we here addressed how protein hydration is tuned at high biological temperatures by analysing homologous acylphosphatase enzymes (AcP) possessin...

Descripción completa

Detalles Bibliográficos
Autores principales: Fusco, Giuliana, Biancaniello, Carmen, Vrettas, Michail D., De Simone, Alfonso
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9742426/
https://www.ncbi.nlm.nih.gov/pubmed/36518847
http://dx.doi.org/10.3389/fmolb.2022.1037445
_version_ 1784848514800418816
author Fusco, Giuliana
Biancaniello, Carmen
Vrettas, Michail D.
De Simone, Alfonso
author_facet Fusco, Giuliana
Biancaniello, Carmen
Vrettas, Michail D.
De Simone, Alfonso
author_sort Fusco, Giuliana
collection PubMed
description Water at the protein surface is an active biological molecule that plays a critical role in many functional processes. Using NMR-restrained MD simulations, we here addressed how protein hydration is tuned at high biological temperatures by analysing homologous acylphosphatase enzymes (AcP) possessing similar structure and dynamics under very different thermal conditions. We found that the hyperthermophilic Sso AcP at 80°C interacts with a lower number of structured waters in the first hydration shell than its human homologous mt AcP at 37°C. Overall, the structural and dynamical properties of waters at the surface of the two enzymes resulted similar in the first hydration shell, including solvent molecules residing in the active site. By contrast the dynamical content of water molecules in the second hydration shell was found to diverge, with higher mobility observed in Sso AcP at 80°C. Taken together the results delineate the subtle differences in the hydration properties of mt AcP and Sso AcP, and indicate that the concept of corresponding states with equivalent dynamics in homologous mesophilic and hyperthermophylic proteins should be extended to the first hydration shell.
format Online
Article
Text
id pubmed-9742426
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-97424262022-12-13 Thermal tuning of protein hydration in a hyperthermophilic enzyme Fusco, Giuliana Biancaniello, Carmen Vrettas, Michail D. De Simone, Alfonso Front Mol Biosci Molecular Biosciences Water at the protein surface is an active biological molecule that plays a critical role in many functional processes. Using NMR-restrained MD simulations, we here addressed how protein hydration is tuned at high biological temperatures by analysing homologous acylphosphatase enzymes (AcP) possessing similar structure and dynamics under very different thermal conditions. We found that the hyperthermophilic Sso AcP at 80°C interacts with a lower number of structured waters in the first hydration shell than its human homologous mt AcP at 37°C. Overall, the structural and dynamical properties of waters at the surface of the two enzymes resulted similar in the first hydration shell, including solvent molecules residing in the active site. By contrast the dynamical content of water molecules in the second hydration shell was found to diverge, with higher mobility observed in Sso AcP at 80°C. Taken together the results delineate the subtle differences in the hydration properties of mt AcP and Sso AcP, and indicate that the concept of corresponding states with equivalent dynamics in homologous mesophilic and hyperthermophylic proteins should be extended to the first hydration shell. Frontiers Media S.A. 2022-11-28 /pmc/articles/PMC9742426/ /pubmed/36518847 http://dx.doi.org/10.3389/fmolb.2022.1037445 Text en Copyright © 2022 Fusco, Biancaniello, Vrettas and De Simone. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Molecular Biosciences
Fusco, Giuliana
Biancaniello, Carmen
Vrettas, Michail D.
De Simone, Alfonso
Thermal tuning of protein hydration in a hyperthermophilic enzyme
title Thermal tuning of protein hydration in a hyperthermophilic enzyme
title_full Thermal tuning of protein hydration in a hyperthermophilic enzyme
title_fullStr Thermal tuning of protein hydration in a hyperthermophilic enzyme
title_full_unstemmed Thermal tuning of protein hydration in a hyperthermophilic enzyme
title_short Thermal tuning of protein hydration in a hyperthermophilic enzyme
title_sort thermal tuning of protein hydration in a hyperthermophilic enzyme
topic Molecular Biosciences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9742426/
https://www.ncbi.nlm.nih.gov/pubmed/36518847
http://dx.doi.org/10.3389/fmolb.2022.1037445
work_keys_str_mv AT fuscogiuliana thermaltuningofproteinhydrationinahyperthermophilicenzyme
AT biancaniellocarmen thermaltuningofproteinhydrationinahyperthermophilicenzyme
AT vrettasmichaild thermaltuningofproteinhydrationinahyperthermophilicenzyme
AT desimonealfonso thermaltuningofproteinhydrationinahyperthermophilicenzyme