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Application of a deep learning system in glaucoma screening and further classification with colour fundus photographs: a case control study
BACKGROUND: To verify efficacy of automatic screening and classification of glaucoma with deep learning system. METHODS: A cross-sectional, retrospective study in a tertiary referral hospital. Patients with healthy optic disc, high-tension, or normal-tension glaucoma were enrolled. Complicated non-g...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9743575/ https://www.ncbi.nlm.nih.gov/pubmed/36510171 http://dx.doi.org/10.1186/s12886-022-02730-2 |
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author | Hung, Kuo-Hsuan Kao, Yu-Ching Tang, Yu-Hsuan Chen, Yi-Ting Wang, Chuen-Heng Wang, Yu-Chen Lee, Oscar Kuang-Sheng |
author_facet | Hung, Kuo-Hsuan Kao, Yu-Ching Tang, Yu-Hsuan Chen, Yi-Ting Wang, Chuen-Heng Wang, Yu-Chen Lee, Oscar Kuang-Sheng |
author_sort | Hung, Kuo-Hsuan |
collection | PubMed |
description | BACKGROUND: To verify efficacy of automatic screening and classification of glaucoma with deep learning system. METHODS: A cross-sectional, retrospective study in a tertiary referral hospital. Patients with healthy optic disc, high-tension, or normal-tension glaucoma were enrolled. Complicated non-glaucomatous optic neuropathy was excluded. Colour and red-free fundus images were collected for development of DLS and comparison of their efficacy. The convolutional neural network with the pre-trained EfficientNet-b0 model was selected for machine learning. Glaucoma screening (Binary) and ternary classification with or without additional demographics (age, gender, high myopia) were evaluated, followed by creating confusion matrix and heatmaps. Area under receiver operating characteristic curve (AUC), accuracy, sensitivity, specificity, and F1 score were viewed as main outcome measures. RESULTS: Two hundred and twenty-two cases (421 eyes) were enrolled, with 1851 images in total (1207 normal and 644 glaucomatous disc). Train set and test set were comprised of 1539 and 312 images, respectively. If demographics were not provided, AUC, accuracy, precision, sensitivity, F1 score, and specificity of our deep learning system in eye-based glaucoma screening were 0.98, 0.91, 0.86, 0.86, 0.86, and 0.94 in test set. Same outcome measures in eye-based ternary classification without demographic data were 0.94, 0.87, 0.87, 0.87, 0.87, and 0.94 in our test set, respectively. Adding demographics has no significant impact on efficacy, but establishing a linkage between eyes and images is helpful for a better performance. Confusion matrix and heatmaps suggested that retinal lesions and quality of photographs could affect classification. Colour fundus images play a major role in glaucoma classification, compared to red-free fundus images. CONCLUSIONS: Promising results with high AUC and specificity were shown in distinguishing normal optic nerve from glaucomatous fundus images and doing further classification. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12886-022-02730-2. |
format | Online Article Text |
id | pubmed-9743575 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-97435752022-12-13 Application of a deep learning system in glaucoma screening and further classification with colour fundus photographs: a case control study Hung, Kuo-Hsuan Kao, Yu-Ching Tang, Yu-Hsuan Chen, Yi-Ting Wang, Chuen-Heng Wang, Yu-Chen Lee, Oscar Kuang-Sheng BMC Ophthalmol Research BACKGROUND: To verify efficacy of automatic screening and classification of glaucoma with deep learning system. METHODS: A cross-sectional, retrospective study in a tertiary referral hospital. Patients with healthy optic disc, high-tension, or normal-tension glaucoma were enrolled. Complicated non-glaucomatous optic neuropathy was excluded. Colour and red-free fundus images were collected for development of DLS and comparison of their efficacy. The convolutional neural network with the pre-trained EfficientNet-b0 model was selected for machine learning. Glaucoma screening (Binary) and ternary classification with or without additional demographics (age, gender, high myopia) were evaluated, followed by creating confusion matrix and heatmaps. Area under receiver operating characteristic curve (AUC), accuracy, sensitivity, specificity, and F1 score were viewed as main outcome measures. RESULTS: Two hundred and twenty-two cases (421 eyes) were enrolled, with 1851 images in total (1207 normal and 644 glaucomatous disc). Train set and test set were comprised of 1539 and 312 images, respectively. If demographics were not provided, AUC, accuracy, precision, sensitivity, F1 score, and specificity of our deep learning system in eye-based glaucoma screening were 0.98, 0.91, 0.86, 0.86, 0.86, and 0.94 in test set. Same outcome measures in eye-based ternary classification without demographic data were 0.94, 0.87, 0.87, 0.87, 0.87, and 0.94 in our test set, respectively. Adding demographics has no significant impact on efficacy, but establishing a linkage between eyes and images is helpful for a better performance. Confusion matrix and heatmaps suggested that retinal lesions and quality of photographs could affect classification. Colour fundus images play a major role in glaucoma classification, compared to red-free fundus images. CONCLUSIONS: Promising results with high AUC and specificity were shown in distinguishing normal optic nerve from glaucomatous fundus images and doing further classification. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12886-022-02730-2. BioMed Central 2022-12-12 /pmc/articles/PMC9743575/ /pubmed/36510171 http://dx.doi.org/10.1186/s12886-022-02730-2 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Hung, Kuo-Hsuan Kao, Yu-Ching Tang, Yu-Hsuan Chen, Yi-Ting Wang, Chuen-Heng Wang, Yu-Chen Lee, Oscar Kuang-Sheng Application of a deep learning system in glaucoma screening and further classification with colour fundus photographs: a case control study |
title | Application of a deep learning system in glaucoma screening and further classification with colour fundus photographs: a case control study |
title_full | Application of a deep learning system in glaucoma screening and further classification with colour fundus photographs: a case control study |
title_fullStr | Application of a deep learning system in glaucoma screening and further classification with colour fundus photographs: a case control study |
title_full_unstemmed | Application of a deep learning system in glaucoma screening and further classification with colour fundus photographs: a case control study |
title_short | Application of a deep learning system in glaucoma screening and further classification with colour fundus photographs: a case control study |
title_sort | application of a deep learning system in glaucoma screening and further classification with colour fundus photographs: a case control study |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9743575/ https://www.ncbi.nlm.nih.gov/pubmed/36510171 http://dx.doi.org/10.1186/s12886-022-02730-2 |
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