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The complete chloroplast genome sequence of Ardisia crispa Thunb.
Ardisia crispa (Thunb.) A. DC. belongs to the genus Ardisia (Myrsinaceae). It is a traditional medicinal plant widely used to treat inflammatory-related diseases in southern China. Here, we provide the complete chloroplast genome of A. crispa from Laibin, Guangxi, PR China using Illumina high-throug...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9744205/ https://www.ncbi.nlm.nih.gov/pubmed/36518737 http://dx.doi.org/10.1080/23802359.2022.2154621 |
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author | Guo, Song Li, Zeyang Liu, Yu Wu, Wuwei |
author_facet | Guo, Song Li, Zeyang Liu, Yu Wu, Wuwei |
author_sort | Guo, Song |
collection | PubMed |
description | Ardisia crispa (Thunb.) A. DC. belongs to the genus Ardisia (Myrsinaceae). It is a traditional medicinal plant widely used to treat inflammatory-related diseases in southern China. Here, we provide the complete chloroplast genome of A. crispa from Laibin, Guangxi, PR China using Illumina high-throughput sequencing approach. The total length of the chloroplast genome is 156,709 bp, including a large single-copy (LSC) region, a small single-copy (SSC) region, and a pair of inverted repeats IRa and IRb regions which are separated by the LSC and SSC, with lengths of 86,301 bp, 18,411 bp, and 25,999 bp, respectively. In general, 132 genes were identified, including 93 protein-coding genes, 31 transfer RNA (tRNA) genes, and eight ribosomal RNA (rRNA) genes. The overall GC content is 47.82%. Phylogenetic analysis revealed that A. crispa is close to congeneric species A. mamillata. |
format | Online Article Text |
id | pubmed-9744205 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-97442052022-12-13 The complete chloroplast genome sequence of Ardisia crispa Thunb. Guo, Song Li, Zeyang Liu, Yu Wu, Wuwei Mitochondrial DNA B Resour Plastome Announcement Ardisia crispa (Thunb.) A. DC. belongs to the genus Ardisia (Myrsinaceae). It is a traditional medicinal plant widely used to treat inflammatory-related diseases in southern China. Here, we provide the complete chloroplast genome of A. crispa from Laibin, Guangxi, PR China using Illumina high-throughput sequencing approach. The total length of the chloroplast genome is 156,709 bp, including a large single-copy (LSC) region, a small single-copy (SSC) region, and a pair of inverted repeats IRa and IRb regions which are separated by the LSC and SSC, with lengths of 86,301 bp, 18,411 bp, and 25,999 bp, respectively. In general, 132 genes were identified, including 93 protein-coding genes, 31 transfer RNA (tRNA) genes, and eight ribosomal RNA (rRNA) genes. The overall GC content is 47.82%. Phylogenetic analysis revealed that A. crispa is close to congeneric species A. mamillata. Taylor & Francis 2022-12-09 /pmc/articles/PMC9744205/ /pubmed/36518737 http://dx.doi.org/10.1080/23802359.2022.2154621 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Plastome Announcement Guo, Song Li, Zeyang Liu, Yu Wu, Wuwei The complete chloroplast genome sequence of Ardisia crispa Thunb. |
title | The complete chloroplast genome sequence of Ardisia crispa Thunb. |
title_full | The complete chloroplast genome sequence of Ardisia crispa Thunb. |
title_fullStr | The complete chloroplast genome sequence of Ardisia crispa Thunb. |
title_full_unstemmed | The complete chloroplast genome sequence of Ardisia crispa Thunb. |
title_short | The complete chloroplast genome sequence of Ardisia crispa Thunb. |
title_sort | complete chloroplast genome sequence of ardisia crispa thunb. |
topic | Plastome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9744205/ https://www.ncbi.nlm.nih.gov/pubmed/36518737 http://dx.doi.org/10.1080/23802359.2022.2154621 |
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