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The complete chloroplast genome sequence of Ardisia crispa Thunb.

Ardisia crispa (Thunb.) A. DC. belongs to the genus Ardisia (Myrsinaceae). It is a traditional medicinal plant widely used to treat inflammatory-related diseases in southern China. Here, we provide the complete chloroplast genome of A. crispa from Laibin, Guangxi, PR China using Illumina high-throug...

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Autores principales: Guo, Song, Li, Zeyang, Liu, Yu, Wu, Wuwei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9744205/
https://www.ncbi.nlm.nih.gov/pubmed/36518737
http://dx.doi.org/10.1080/23802359.2022.2154621
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author Guo, Song
Li, Zeyang
Liu, Yu
Wu, Wuwei
author_facet Guo, Song
Li, Zeyang
Liu, Yu
Wu, Wuwei
author_sort Guo, Song
collection PubMed
description Ardisia crispa (Thunb.) A. DC. belongs to the genus Ardisia (Myrsinaceae). It is a traditional medicinal plant widely used to treat inflammatory-related diseases in southern China. Here, we provide the complete chloroplast genome of A. crispa from Laibin, Guangxi, PR China using Illumina high-throughput sequencing approach. The total length of the chloroplast genome is 156,709 bp, including a large single-copy (LSC) region, a small single-copy (SSC) region, and a pair of inverted repeats IRa and IRb regions which are separated by the LSC and SSC, with lengths of 86,301 bp, 18,411 bp, and 25,999 bp, respectively. In general, 132 genes were identified, including 93 protein-coding genes, 31 transfer RNA (tRNA) genes, and eight ribosomal RNA (rRNA) genes. The overall GC content is 47.82%. Phylogenetic analysis revealed that A. crispa is close to congeneric species A. mamillata.
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spelling pubmed-97442052022-12-13 The complete chloroplast genome sequence of Ardisia crispa Thunb. Guo, Song Li, Zeyang Liu, Yu Wu, Wuwei Mitochondrial DNA B Resour Plastome Announcement Ardisia crispa (Thunb.) A. DC. belongs to the genus Ardisia (Myrsinaceae). It is a traditional medicinal plant widely used to treat inflammatory-related diseases in southern China. Here, we provide the complete chloroplast genome of A. crispa from Laibin, Guangxi, PR China using Illumina high-throughput sequencing approach. The total length of the chloroplast genome is 156,709 bp, including a large single-copy (LSC) region, a small single-copy (SSC) region, and a pair of inverted repeats IRa and IRb regions which are separated by the LSC and SSC, with lengths of 86,301 bp, 18,411 bp, and 25,999 bp, respectively. In general, 132 genes were identified, including 93 protein-coding genes, 31 transfer RNA (tRNA) genes, and eight ribosomal RNA (rRNA) genes. The overall GC content is 47.82%. Phylogenetic analysis revealed that A. crispa is close to congeneric species A. mamillata. Taylor & Francis 2022-12-09 /pmc/articles/PMC9744205/ /pubmed/36518737 http://dx.doi.org/10.1080/23802359.2022.2154621 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Plastome Announcement
Guo, Song
Li, Zeyang
Liu, Yu
Wu, Wuwei
The complete chloroplast genome sequence of Ardisia crispa Thunb.
title The complete chloroplast genome sequence of Ardisia crispa Thunb.
title_full The complete chloroplast genome sequence of Ardisia crispa Thunb.
title_fullStr The complete chloroplast genome sequence of Ardisia crispa Thunb.
title_full_unstemmed The complete chloroplast genome sequence of Ardisia crispa Thunb.
title_short The complete chloroplast genome sequence of Ardisia crispa Thunb.
title_sort complete chloroplast genome sequence of ardisia crispa thunb.
topic Plastome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9744205/
https://www.ncbi.nlm.nih.gov/pubmed/36518737
http://dx.doi.org/10.1080/23802359.2022.2154621
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