The complete mitogenome and phylogeny analysis of Pseudohemiculter hainanensis (Boulenger, 1900) (Cyprinidae: Cultrinae)

The Pseudohemiculter hainanensis (Boulenger, 1900) is a small Cyprinidae fish that has a wide distribution in China. In this study, we characterized the complete mitochondrial genome of P. hainanensis by the Illumina NovaSeq sequencing platform in Guangxi, China. The assembled mitogenome is 16,647 b...

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Autores principales: Wang, Yifei, He, Jiayang, Wu, Zhiqiang, Huang, Liangliang, Gao, Minghui, Li, Mingsi, Feng, Jie
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
MitoGenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9744223/
https://www.ncbi.nlm.nih.gov/pubmed/36518738
http://dx.doi.org/10.1080/23802359.2022.2151828
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author Wang, Yifei
He, Jiayang
Wu, Zhiqiang
Huang, Liangliang
Gao, Minghui
Li, Mingsi
Feng, Jie
author_facet Wang, Yifei
He, Jiayang
Wu, Zhiqiang
Huang, Liangliang
Gao, Minghui
Li, Mingsi
Feng, Jie
author_sort Wang, Yifei
collection PubMed
description The Pseudohemiculter hainanensis (Boulenger, 1900) is a small Cyprinidae fish that has a wide distribution in China. In this study, we characterized the complete mitochondrial genome of P. hainanensis by the Illumina NovaSeq sequencing platform in Guangxi, China. The assembled mitogenome is 16,647 base pairs (bp) and consists of 13 protein-coding genes (PCGs), 22 transfer RNAs, two ribosomal RNAs, and a control region (D-loop). Nucleotide composition of the complete mitogenome is 29.69% (A), 24.82% (T), 27.97% (C), and 17.52% (G), with an A + T bias of 54.51%. The maximum-likelihood tree based on 13 PCGs showed that Pseudohemiculter hainanensis formed an independent lineage and P. hainanensis was closer to T. houdemeri.
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spelling pubmed-97442232022-12-13 The complete mitogenome and phylogeny analysis of Pseudohemiculter hainanensis (Boulenger, 1900) (Cyprinidae: Cultrinae) Wang, Yifei He, Jiayang Wu, Zhiqiang Huang, Liangliang Gao, Minghui Li, Mingsi Feng, Jie Mitochondrial DNA B Resour MitoGenome Announcement The Pseudohemiculter hainanensis (Boulenger, 1900) is a small Cyprinidae fish that has a wide distribution in China. In this study, we characterized the complete mitochondrial genome of P. hainanensis by the Illumina NovaSeq sequencing platform in Guangxi, China. The assembled mitogenome is 16,647 base pairs (bp) and consists of 13 protein-coding genes (PCGs), 22 transfer RNAs, two ribosomal RNAs, and a control region (D-loop). Nucleotide composition of the complete mitogenome is 29.69% (A), 24.82% (T), 27.97% (C), and 17.52% (G), with an A + T bias of 54.51%. The maximum-likelihood tree based on 13 PCGs showed that Pseudohemiculter hainanensis formed an independent lineage and P. hainanensis was closer to T. houdemeri. Taylor & Francis 2022-12-09 /pmc/articles/PMC9744223/ /pubmed/36518738 http://dx.doi.org/10.1080/23802359.2022.2151828 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle MitoGenome Announcement
Wang, Yifei
He, Jiayang
Wu, Zhiqiang
Huang, Liangliang
Gao, Minghui
Li, Mingsi
Feng, Jie
The complete mitogenome and phylogeny analysis of Pseudohemiculter hainanensis (Boulenger, 1900) (Cyprinidae: Cultrinae)
title The complete mitogenome and phylogeny analysis of Pseudohemiculter hainanensis (Boulenger, 1900) (Cyprinidae: Cultrinae)
title_full The complete mitogenome and phylogeny analysis of Pseudohemiculter hainanensis (Boulenger, 1900) (Cyprinidae: Cultrinae)
title_fullStr The complete mitogenome and phylogeny analysis of Pseudohemiculter hainanensis (Boulenger, 1900) (Cyprinidae: Cultrinae)
title_full_unstemmed The complete mitogenome and phylogeny analysis of Pseudohemiculter hainanensis (Boulenger, 1900) (Cyprinidae: Cultrinae)
title_short The complete mitogenome and phylogeny analysis of Pseudohemiculter hainanensis (Boulenger, 1900) (Cyprinidae: Cultrinae)
title_sort complete mitogenome and phylogeny analysis of pseudohemiculter hainanensis (boulenger, 1900) (cyprinidae: cultrinae)
topic MitoGenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9744223/
https://www.ncbi.nlm.nih.gov/pubmed/36518738
http://dx.doi.org/10.1080/23802359.2022.2151828
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