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Optimized phylogenetic clustering of HIV-1 sequence data for public health applications

Clusters of genetically similar infections suggest rapid transmission and may indicate priorities for public health action or reveal underlying epidemiological processes. However, clusters often require user-defined thresholds and are sensitive to non-epidemiological factors, such as non-random samp...

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Detalles Bibliográficos
Autores principales: Chato, Connor, Feng, Yi, Ruan, Yuhua, Xing, Hui, Herbeck, Joshua, Kalish, Marcia, Poon, Art F. Y.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9744331/
https://www.ncbi.nlm.nih.gov/pubmed/36449514
http://dx.doi.org/10.1371/journal.pcbi.1010745