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Genetics of Ataxias in Indian Population: A Collative Insight from a Common Genetic Screening Tool

Cerebellar ataxias (CAs) represent a group of autosomal dominant and recessive neurodegenerative disorders affecting cerebellum with or without spinal cord. Overall, CAs have preponderance for tandem nucleotide repeat expansions as an etiological factor (10 TREs explain nearly 30–40% of ataxia cohor...

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Autores principales: Sharma, Pooja, Sonakar, Akhilesh Kumar, Tyagi, Nishu, Suroliya, Varun, Kumar, Manish, Kutum, Rintu, Asokchandran, Vivekananda, Ambawat, Sakshi, Shamim, Uzma, Anand, Avni, Ahmad, Ishtaq, Shakya, Sunil, Uppili, Bharathram, Mathur, Aradhana, Parveen, Shaista, Jain, Shweta, Singh, Jyotsna, Seth, Malika, Zahra, Sana, Joshi, Aditi, Goel, Divya, Sahni, Shweta, Kamai, Asangla, Wadhwa, Saruchi, Murali, Aparna, Saifi, Sheeba, Chowdhury, Debashish, Pandey, Sanjay, Anand, Kuljeet Singh, Narasimhan, Ranganathan Lakshmi, Laskar, Sanghamitra, Kushwaha, Suman, Kumar, Mukesh, Shaji, Cheruvallill Velayudhan, Srivastava, Madakasira Vasantha Padma, Srivastava, Achal K., Faruq, Mohammed
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9744545/
https://www.ncbi.nlm.nih.gov/pubmed/36618024
http://dx.doi.org/10.1002/ggn2.202100078
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author Sharma, Pooja
Sonakar, Akhilesh Kumar
Tyagi, Nishu
Suroliya, Varun
Kumar, Manish
Kutum, Rintu
Asokchandran, Vivekananda
Ambawat, Sakshi
Shamim, Uzma
Anand, Avni
Ahmad, Ishtaq
Shakya, Sunil
Uppili, Bharathram
Mathur, Aradhana
Parveen, Shaista
Jain, Shweta
Singh, Jyotsna
Seth, Malika
Zahra, Sana
Joshi, Aditi
Goel, Divya
Sahni, Shweta
Kamai, Asangla
Wadhwa, Saruchi
Murali, Aparna
Saifi, Sheeba
Chowdhury, Debashish
Pandey, Sanjay
Anand, Kuljeet Singh
Narasimhan, Ranganathan Lakshmi
Laskar, Sanghamitra
Kushwaha, Suman
Kumar, Mukesh
Shaji, Cheruvallill Velayudhan
Srivastava, Madakasira Vasantha Padma
Srivastava, Achal K.
Faruq, Mohammed
author_facet Sharma, Pooja
Sonakar, Akhilesh Kumar
Tyagi, Nishu
Suroliya, Varun
Kumar, Manish
Kutum, Rintu
Asokchandran, Vivekananda
Ambawat, Sakshi
Shamim, Uzma
Anand, Avni
Ahmad, Ishtaq
Shakya, Sunil
Uppili, Bharathram
Mathur, Aradhana
Parveen, Shaista
Jain, Shweta
Singh, Jyotsna
Seth, Malika
Zahra, Sana
Joshi, Aditi
Goel, Divya
Sahni, Shweta
Kamai, Asangla
Wadhwa, Saruchi
Murali, Aparna
Saifi, Sheeba
Chowdhury, Debashish
Pandey, Sanjay
Anand, Kuljeet Singh
Narasimhan, Ranganathan Lakshmi
Laskar, Sanghamitra
Kushwaha, Suman
Kumar, Mukesh
Shaji, Cheruvallill Velayudhan
Srivastava, Madakasira Vasantha Padma
Srivastava, Achal K.
Faruq, Mohammed
author_sort Sharma, Pooja
collection PubMed
description Cerebellar ataxias (CAs) represent a group of autosomal dominant and recessive neurodegenerative disorders affecting cerebellum with or without spinal cord. Overall, CAs have preponderance for tandem nucleotide repeat expansions as an etiological factor (10 TREs explain nearly 30–40% of ataxia cohort globally). The experience of 10 years of common genetic ataxia subtypes for ≈5600 patients’ referrals (Pan‐India) received at a single center is shared herein. Frequencies (in %, n) of SCA types and FRDA in the sample cohort are observed as follows: SCA12 (8.6%, 490); SCA2 (8.5%, 482); SCA1 (4.8%, 272); SCA3 (2%, 113); SCA7 (0.5%, 28); SCA6 (0.1%, 05); SCA17 (0.1%, 05), and FRDA (2.2%, 127). A significant amount of variability in TRE lengths at each locus is observed, we noted presence of biallelic expansion, co‐occurrence of SCA‐subtypes, and the presence of premutable normal alleles. The frequency of mutated GAA‐FRDA allele in healthy controls is 1/158 (0.63%), thus an expected FRDA prevalence of 1:100 000 persons. The data of this study are relevant not only for clinical decision making but also for guidance in direction of genetic investigations, transancestral comparison of genotypes, and lastly provide insight for policy decision for the consideration of SCAs under rare disease category.
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spelling pubmed-97445452023-01-06 Genetics of Ataxias in Indian Population: A Collative Insight from a Common Genetic Screening Tool Sharma, Pooja Sonakar, Akhilesh Kumar Tyagi, Nishu Suroliya, Varun Kumar, Manish Kutum, Rintu Asokchandran, Vivekananda Ambawat, Sakshi Shamim, Uzma Anand, Avni Ahmad, Ishtaq Shakya, Sunil Uppili, Bharathram Mathur, Aradhana Parveen, Shaista Jain, Shweta Singh, Jyotsna Seth, Malika Zahra, Sana Joshi, Aditi Goel, Divya Sahni, Shweta Kamai, Asangla Wadhwa, Saruchi Murali, Aparna Saifi, Sheeba Chowdhury, Debashish Pandey, Sanjay Anand, Kuljeet Singh Narasimhan, Ranganathan Lakshmi Laskar, Sanghamitra Kushwaha, Suman Kumar, Mukesh Shaji, Cheruvallill Velayudhan Srivastava, Madakasira Vasantha Padma Srivastava, Achal K. Faruq, Mohammed Adv Genet (Hoboken) Research Articles Cerebellar ataxias (CAs) represent a group of autosomal dominant and recessive neurodegenerative disorders affecting cerebellum with or without spinal cord. Overall, CAs have preponderance for tandem nucleotide repeat expansions as an etiological factor (10 TREs explain nearly 30–40% of ataxia cohort globally). The experience of 10 years of common genetic ataxia subtypes for ≈5600 patients’ referrals (Pan‐India) received at a single center is shared herein. Frequencies (in %, n) of SCA types and FRDA in the sample cohort are observed as follows: SCA12 (8.6%, 490); SCA2 (8.5%, 482); SCA1 (4.8%, 272); SCA3 (2%, 113); SCA7 (0.5%, 28); SCA6 (0.1%, 05); SCA17 (0.1%, 05), and FRDA (2.2%, 127). A significant amount of variability in TRE lengths at each locus is observed, we noted presence of biallelic expansion, co‐occurrence of SCA‐subtypes, and the presence of premutable normal alleles. The frequency of mutated GAA‐FRDA allele in healthy controls is 1/158 (0.63%), thus an expected FRDA prevalence of 1:100 000 persons. The data of this study are relevant not only for clinical decision making but also for guidance in direction of genetic investigations, transancestral comparison of genotypes, and lastly provide insight for policy decision for the consideration of SCAs under rare disease category. John Wiley and Sons Inc. 2022-03-10 /pmc/articles/PMC9744545/ /pubmed/36618024 http://dx.doi.org/10.1002/ggn2.202100078 Text en © 2022 The Authors. Advanced Genetics published by Wiley Periodicals LLC https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Sharma, Pooja
Sonakar, Akhilesh Kumar
Tyagi, Nishu
Suroliya, Varun
Kumar, Manish
Kutum, Rintu
Asokchandran, Vivekananda
Ambawat, Sakshi
Shamim, Uzma
Anand, Avni
Ahmad, Ishtaq
Shakya, Sunil
Uppili, Bharathram
Mathur, Aradhana
Parveen, Shaista
Jain, Shweta
Singh, Jyotsna
Seth, Malika
Zahra, Sana
Joshi, Aditi
Goel, Divya
Sahni, Shweta
Kamai, Asangla
Wadhwa, Saruchi
Murali, Aparna
Saifi, Sheeba
Chowdhury, Debashish
Pandey, Sanjay
Anand, Kuljeet Singh
Narasimhan, Ranganathan Lakshmi
Laskar, Sanghamitra
Kushwaha, Suman
Kumar, Mukesh
Shaji, Cheruvallill Velayudhan
Srivastava, Madakasira Vasantha Padma
Srivastava, Achal K.
Faruq, Mohammed
Genetics of Ataxias in Indian Population: A Collative Insight from a Common Genetic Screening Tool
title Genetics of Ataxias in Indian Population: A Collative Insight from a Common Genetic Screening Tool
title_full Genetics of Ataxias in Indian Population: A Collative Insight from a Common Genetic Screening Tool
title_fullStr Genetics of Ataxias in Indian Population: A Collative Insight from a Common Genetic Screening Tool
title_full_unstemmed Genetics of Ataxias in Indian Population: A Collative Insight from a Common Genetic Screening Tool
title_short Genetics of Ataxias in Indian Population: A Collative Insight from a Common Genetic Screening Tool
title_sort genetics of ataxias in indian population: a collative insight from a common genetic screening tool
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9744545/
https://www.ncbi.nlm.nih.gov/pubmed/36618024
http://dx.doi.org/10.1002/ggn2.202100078
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