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Visual and label-free ASFV and PCV2 detection by CRISPR-Cas12a combined with G-quadruplex

African swine fever (ASF) and postweaning multisystemic wasting syndrome (PMWS) are acute infectious diseases caused by the African swine fever virus (ASFV) and porcine circovirus type 2 (PCV2). At present, there are no effective vaccines for the prevention of ASFV. PMWS, which is harmful to the dom...

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Autores principales: Wang, Ying, Li, Rong, Zhang, Yang, Zhang, Weida, Hu, Sishun, Li, Zili
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9745048/
https://www.ncbi.nlm.nih.gov/pubmed/36524221
http://dx.doi.org/10.3389/fvets.2022.1036744
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author Wang, Ying
Li, Rong
Zhang, Yang
Zhang, Weida
Hu, Sishun
Li, Zili
author_facet Wang, Ying
Li, Rong
Zhang, Yang
Zhang, Weida
Hu, Sishun
Li, Zili
author_sort Wang, Ying
collection PubMed
description African swine fever (ASF) and postweaning multisystemic wasting syndrome (PMWS) are acute infectious diseases caused by the African swine fever virus (ASFV) and porcine circovirus type 2 (PCV2). At present, there are no effective vaccines for the prevention of ASFV. PMWS, which is harmful to the domestic and even the world pig industry, is difficult to cure and has a high mortality. So, developing simple, inexpensive, and accurate analytical methods to detect and effectively diagnose ASFV and PCV2 can be conducive to avoid ASFV and PCV2 infection. CRISPR has become a potentially rapid diagnostic tool due to recent discoveries of the trans-cleavage properties of CRISPR type V effectors. Herein, we report the visual detection based on CRISPR-Cas12a (cpf1), which is more convenient than fluorescence detection. Through in vitro cleavage target DNA activation, Cas12a can trans-cleavage ssDNA G-quadruplex. TMB/H(2)O(2) and Hemin cannot be catalyzed by cleavaged G-DNA to produce green color products. This protocol is useful for the detection of ASFV and PCV2 with high sensitivity. This method can enable the development of visual and label-free ASFV and PCV2 detection and can be carried out in the field without relying on instruments or power. This method can complete nucleic acid detection at 37 °C without using other instruments or energy. Our research has expanded the application of Cas12a and laid the foundation for the field's rapid detection of viral nucleic acid in future.
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spelling pubmed-97450482022-12-14 Visual and label-free ASFV and PCV2 detection by CRISPR-Cas12a combined with G-quadruplex Wang, Ying Li, Rong Zhang, Yang Zhang, Weida Hu, Sishun Li, Zili Front Vet Sci Veterinary Science African swine fever (ASF) and postweaning multisystemic wasting syndrome (PMWS) are acute infectious diseases caused by the African swine fever virus (ASFV) and porcine circovirus type 2 (PCV2). At present, there are no effective vaccines for the prevention of ASFV. PMWS, which is harmful to the domestic and even the world pig industry, is difficult to cure and has a high mortality. So, developing simple, inexpensive, and accurate analytical methods to detect and effectively diagnose ASFV and PCV2 can be conducive to avoid ASFV and PCV2 infection. CRISPR has become a potentially rapid diagnostic tool due to recent discoveries of the trans-cleavage properties of CRISPR type V effectors. Herein, we report the visual detection based on CRISPR-Cas12a (cpf1), which is more convenient than fluorescence detection. Through in vitro cleavage target DNA activation, Cas12a can trans-cleavage ssDNA G-quadruplex. TMB/H(2)O(2) and Hemin cannot be catalyzed by cleavaged G-DNA to produce green color products. This protocol is useful for the detection of ASFV and PCV2 with high sensitivity. This method can enable the development of visual and label-free ASFV and PCV2 detection and can be carried out in the field without relying on instruments or power. This method can complete nucleic acid detection at 37 °C without using other instruments or energy. Our research has expanded the application of Cas12a and laid the foundation for the field's rapid detection of viral nucleic acid in future. Frontiers Media S.A. 2022-11-29 /pmc/articles/PMC9745048/ /pubmed/36524221 http://dx.doi.org/10.3389/fvets.2022.1036744 Text en Copyright © 2022 Wang, Li, Zhang, Zhang, Hu and Li. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Veterinary Science
Wang, Ying
Li, Rong
Zhang, Yang
Zhang, Weida
Hu, Sishun
Li, Zili
Visual and label-free ASFV and PCV2 detection by CRISPR-Cas12a combined with G-quadruplex
title Visual and label-free ASFV and PCV2 detection by CRISPR-Cas12a combined with G-quadruplex
title_full Visual and label-free ASFV and PCV2 detection by CRISPR-Cas12a combined with G-quadruplex
title_fullStr Visual and label-free ASFV and PCV2 detection by CRISPR-Cas12a combined with G-quadruplex
title_full_unstemmed Visual and label-free ASFV and PCV2 detection by CRISPR-Cas12a combined with G-quadruplex
title_short Visual and label-free ASFV and PCV2 detection by CRISPR-Cas12a combined with G-quadruplex
title_sort visual and label-free asfv and pcv2 detection by crispr-cas12a combined with g-quadruplex
topic Veterinary Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9745048/
https://www.ncbi.nlm.nih.gov/pubmed/36524221
http://dx.doi.org/10.3389/fvets.2022.1036744
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