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Cotton aphid infestation monitoring using Sentinel-2 MSI imagery coupled with derivative of ratio spectroscopy and random forest algorithm

Aphids are one of the main pests of cotton and have been an important disaster limiting cotton yield. It is important to use satellite multispectral data to monitor the severity of cotton aphids in a timely and accurate manner on regional scale. Based on the combination of derivative of ratio spectr...

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Autores principales: Fu, Hancong, Zhao, Hengqian, Song, Rui, Yang, Yifeng, Li, Zihan, Zhang, Shijia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9745077/
https://www.ncbi.nlm.nih.gov/pubmed/36523613
http://dx.doi.org/10.3389/fpls.2022.1029529
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author Fu, Hancong
Zhao, Hengqian
Song, Rui
Yang, Yifeng
Li, Zihan
Zhang, Shijia
author_facet Fu, Hancong
Zhao, Hengqian
Song, Rui
Yang, Yifeng
Li, Zihan
Zhang, Shijia
author_sort Fu, Hancong
collection PubMed
description Aphids are one of the main pests of cotton and have been an important disaster limiting cotton yield. It is important to use satellite multispectral data to monitor the severity of cotton aphids in a timely and accurate manner on regional scale. Based on the combination of derivative of ratio spectra (DRS) and random forest (RF) algorithm, this study researched the quantitative monitoring model of cotton aphid severity based on Sentinel-2 data. First, the cotton area was extracted by using a supervised classification algorithm and the vegetation index threshold method. Then, the DRS algorithm was used to analyze the spectral characteristics of cotton aphids from three scales, and the Pearson correlation analysis algorithm was used to extract the bands significantly related to aphid infestation. Finally, the RF model was trained by ground sampling points and its accuracy was evaluated. The optimal model results were selected by the cross-validation method, and the accuracy was compared with the four classical classification algorithms. The results showed that (1) the canopy spectral reflectance curves at different grades of cotton aphid infestation were significantly different, with a significant positive correlation between cotton aphid grade and spectral reflectance in the visible band range and a negative correlation in the near-infrared band range; (2) The DRS algorithm could effectively remove the interference of the background endmember of satellite multispectral image pixels and enhance the aphid spectral features. The analysis results from three different scales and the evaluation results demonstrate the effectiveness of the algorithm in processing satellite multispectral data; (3) After the DRS processing, Sentinel-2 multispectral images could effectively classify the severity of cotton aphid infestation by the RF model with an overall classification accuracy of 80% and a kappa coefficient of 0.73. Compared with the results of four classical classification algorithms, the proposed algorithm has the best accuracy, which proves the superiority of RF. Based on satellite multispectral data, the DRS and RF can be combined to monitor the severity of cotton aphids on a regional scale, and the accuracy can meet the actual need.
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spelling pubmed-97450772022-12-14 Cotton aphid infestation monitoring using Sentinel-2 MSI imagery coupled with derivative of ratio spectroscopy and random forest algorithm Fu, Hancong Zhao, Hengqian Song, Rui Yang, Yifeng Li, Zihan Zhang, Shijia Front Plant Sci Plant Science Aphids are one of the main pests of cotton and have been an important disaster limiting cotton yield. It is important to use satellite multispectral data to monitor the severity of cotton aphids in a timely and accurate manner on regional scale. Based on the combination of derivative of ratio spectra (DRS) and random forest (RF) algorithm, this study researched the quantitative monitoring model of cotton aphid severity based on Sentinel-2 data. First, the cotton area was extracted by using a supervised classification algorithm and the vegetation index threshold method. Then, the DRS algorithm was used to analyze the spectral characteristics of cotton aphids from three scales, and the Pearson correlation analysis algorithm was used to extract the bands significantly related to aphid infestation. Finally, the RF model was trained by ground sampling points and its accuracy was evaluated. The optimal model results were selected by the cross-validation method, and the accuracy was compared with the four classical classification algorithms. The results showed that (1) the canopy spectral reflectance curves at different grades of cotton aphid infestation were significantly different, with a significant positive correlation between cotton aphid grade and spectral reflectance in the visible band range and a negative correlation in the near-infrared band range; (2) The DRS algorithm could effectively remove the interference of the background endmember of satellite multispectral image pixels and enhance the aphid spectral features. The analysis results from three different scales and the evaluation results demonstrate the effectiveness of the algorithm in processing satellite multispectral data; (3) After the DRS processing, Sentinel-2 multispectral images could effectively classify the severity of cotton aphid infestation by the RF model with an overall classification accuracy of 80% and a kappa coefficient of 0.73. Compared with the results of four classical classification algorithms, the proposed algorithm has the best accuracy, which proves the superiority of RF. Based on satellite multispectral data, the DRS and RF can be combined to monitor the severity of cotton aphids on a regional scale, and the accuracy can meet the actual need. Frontiers Media S.A. 2022-11-29 /pmc/articles/PMC9745077/ /pubmed/36523613 http://dx.doi.org/10.3389/fpls.2022.1029529 Text en Copyright © 2022 Fu, Zhao, Song, Yang, Li and Zhang https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Plant Science
Fu, Hancong
Zhao, Hengqian
Song, Rui
Yang, Yifeng
Li, Zihan
Zhang, Shijia
Cotton aphid infestation monitoring using Sentinel-2 MSI imagery coupled with derivative of ratio spectroscopy and random forest algorithm
title Cotton aphid infestation monitoring using Sentinel-2 MSI imagery coupled with derivative of ratio spectroscopy and random forest algorithm
title_full Cotton aphid infestation monitoring using Sentinel-2 MSI imagery coupled with derivative of ratio spectroscopy and random forest algorithm
title_fullStr Cotton aphid infestation monitoring using Sentinel-2 MSI imagery coupled with derivative of ratio spectroscopy and random forest algorithm
title_full_unstemmed Cotton aphid infestation monitoring using Sentinel-2 MSI imagery coupled with derivative of ratio spectroscopy and random forest algorithm
title_short Cotton aphid infestation monitoring using Sentinel-2 MSI imagery coupled with derivative of ratio spectroscopy and random forest algorithm
title_sort cotton aphid infestation monitoring using sentinel-2 msi imagery coupled with derivative of ratio spectroscopy and random forest algorithm
topic Plant Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9745077/
https://www.ncbi.nlm.nih.gov/pubmed/36523613
http://dx.doi.org/10.3389/fpls.2022.1029529
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