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Cuproptosis key gene FDX1 is a prognostic biomarker and associated with immune infiltration in glioma

Recent studies have found that the protein encoded by the FDX1 gene is involved in mediating Cuproptosis as a regulator of protein lipoylation and related to immune response process of tumors. However, the specific biological function of FDX1 in glioma is currently unclear. To explore the potential...

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Autores principales: Lu, Hanwen, Zhou, Liwei, Zhang, Bingchang, Xie, Yuanyuan, Yang, Huiyin, Wang, Zhanxiang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9745336/
https://www.ncbi.nlm.nih.gov/pubmed/36523779
http://dx.doi.org/10.3389/fmed.2022.939776
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author Lu, Hanwen
Zhou, Liwei
Zhang, Bingchang
Xie, Yuanyuan
Yang, Huiyin
Wang, Zhanxiang
author_facet Lu, Hanwen
Zhou, Liwei
Zhang, Bingchang
Xie, Yuanyuan
Yang, Huiyin
Wang, Zhanxiang
author_sort Lu, Hanwen
collection PubMed
description Recent studies have found that the protein encoded by the FDX1 gene is involved in mediating Cuproptosis as a regulator of protein lipoylation and related to immune response process of tumors. However, the specific biological function of FDX1 in glioma is currently unclear. To explore the potential function of FDX1, this study explored the correlation between the expression of FDX1 in cancers and survival prognosis by analyzing the public databases of GEPIA and Cbioportal. Immune infiltration was analyzed by the TIMER2.0 database in tumors. The possible biological processes and functions of FDX1-related in glioma were annotated through gene enrichment. Relationship between Cuproptosis and autophagy was explored through gene co-expression studies. Summary and conclusions of this study: (1) FDX1 is highly expressed in gliomas and associated with poor prognosis in low-grade gliomas (LGG). (2) Gene annotation indicates that FDX1 is mainly involved in the tumor protein lipoylation and cell death. (3) FDX1 expression is positively correlated with the infiltration of immune cells. (4) LIPT2 and NNAT, two other genes involved in lipoylation, may be unidentified marker gene for Cuproptosis. And the Cuproptosis genes related to FDX1 were positively correlated with the expression of autophagy marker genes Atg5, Atg12, and BECN-1. This evidence suggests that there may be some interaction between FDX1 mediated Cuproptosis and autophagy. In summary, FDX1 may serve as a potential immunotherapy target and prognostic marker for Glioma.
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spelling pubmed-97453362022-12-14 Cuproptosis key gene FDX1 is a prognostic biomarker and associated with immune infiltration in glioma Lu, Hanwen Zhou, Liwei Zhang, Bingchang Xie, Yuanyuan Yang, Huiyin Wang, Zhanxiang Front Med (Lausanne) Medicine Recent studies have found that the protein encoded by the FDX1 gene is involved in mediating Cuproptosis as a regulator of protein lipoylation and related to immune response process of tumors. However, the specific biological function of FDX1 in glioma is currently unclear. To explore the potential function of FDX1, this study explored the correlation between the expression of FDX1 in cancers and survival prognosis by analyzing the public databases of GEPIA and Cbioportal. Immune infiltration was analyzed by the TIMER2.0 database in tumors. The possible biological processes and functions of FDX1-related in glioma were annotated through gene enrichment. Relationship between Cuproptosis and autophagy was explored through gene co-expression studies. Summary and conclusions of this study: (1) FDX1 is highly expressed in gliomas and associated with poor prognosis in low-grade gliomas (LGG). (2) Gene annotation indicates that FDX1 is mainly involved in the tumor protein lipoylation and cell death. (3) FDX1 expression is positively correlated with the infiltration of immune cells. (4) LIPT2 and NNAT, two other genes involved in lipoylation, may be unidentified marker gene for Cuproptosis. And the Cuproptosis genes related to FDX1 were positively correlated with the expression of autophagy marker genes Atg5, Atg12, and BECN-1. This evidence suggests that there may be some interaction between FDX1 mediated Cuproptosis and autophagy. In summary, FDX1 may serve as a potential immunotherapy target and prognostic marker for Glioma. Frontiers Media S.A. 2022-11-29 /pmc/articles/PMC9745336/ /pubmed/36523779 http://dx.doi.org/10.3389/fmed.2022.939776 Text en Copyright © 2022 Lu, Zhou, Zhang, Xie, Yang and Wang. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Medicine
Lu, Hanwen
Zhou, Liwei
Zhang, Bingchang
Xie, Yuanyuan
Yang, Huiyin
Wang, Zhanxiang
Cuproptosis key gene FDX1 is a prognostic biomarker and associated with immune infiltration in glioma
title Cuproptosis key gene FDX1 is a prognostic biomarker and associated with immune infiltration in glioma
title_full Cuproptosis key gene FDX1 is a prognostic biomarker and associated with immune infiltration in glioma
title_fullStr Cuproptosis key gene FDX1 is a prognostic biomarker and associated with immune infiltration in glioma
title_full_unstemmed Cuproptosis key gene FDX1 is a prognostic biomarker and associated with immune infiltration in glioma
title_short Cuproptosis key gene FDX1 is a prognostic biomarker and associated with immune infiltration in glioma
title_sort cuproptosis key gene fdx1 is a prognostic biomarker and associated with immune infiltration in glioma
topic Medicine
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9745336/
https://www.ncbi.nlm.nih.gov/pubmed/36523779
http://dx.doi.org/10.3389/fmed.2022.939776
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