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Isolation, characterization and genome analysis of an orphan phage FoX4 of the new Foxquatrovirus genus
The growing interest in the therapeutic application of bacteriophages leads to a drastic increase in the number of sequenced genomes. Luckily, recent insights in phage taxonomy facilitate the classification of phages in a comprehensive and data-driven manner as recently proposed by the International...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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BioMed Central
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9746216/ https://www.ncbi.nlm.nih.gov/pubmed/36513996 http://dx.doi.org/10.1186/s12866-022-02719-3 |
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author | Holtappels, D. Fortuna, K. J. Vallino, M. Lavigne, R. Wagemans, J. |
author_facet | Holtappels, D. Fortuna, K. J. Vallino, M. Lavigne, R. Wagemans, J. |
author_sort | Holtappels, D. |
collection | PubMed |
description | The growing interest in the therapeutic application of bacteriophages leads to a drastic increase in the number of sequenced genomes. Luckily, recent insights in phage taxonomy facilitate the classification of phages in a comprehensive and data-driven manner as recently proposed by the International Committee on Taxonomy of Viruses. In this research, we present the taxonomical classification of a novel, narrow host range Xanthomonas phage FoX4, isolated from a Brussels sprouts field in Belgium infested with Xanthomonas campestris pv. campestris. The phage has a limited ability to lyse a bacterial culture, yet adsorbs efficiently to its host. Based on its genome sequence and low similarity to previously described phages, the phage comprises the novel phage genus Foxquatrovirus. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12866-022-02719-3. |
format | Online Article Text |
id | pubmed-9746216 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-97462162022-12-14 Isolation, characterization and genome analysis of an orphan phage FoX4 of the new Foxquatrovirus genus Holtappels, D. Fortuna, K. J. Vallino, M. Lavigne, R. Wagemans, J. BMC Microbiol Research The growing interest in the therapeutic application of bacteriophages leads to a drastic increase in the number of sequenced genomes. Luckily, recent insights in phage taxonomy facilitate the classification of phages in a comprehensive and data-driven manner as recently proposed by the International Committee on Taxonomy of Viruses. In this research, we present the taxonomical classification of a novel, narrow host range Xanthomonas phage FoX4, isolated from a Brussels sprouts field in Belgium infested with Xanthomonas campestris pv. campestris. The phage has a limited ability to lyse a bacterial culture, yet adsorbs efficiently to its host. Based on its genome sequence and low similarity to previously described phages, the phage comprises the novel phage genus Foxquatrovirus. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12866-022-02719-3. BioMed Central 2022-12-13 /pmc/articles/PMC9746216/ /pubmed/36513996 http://dx.doi.org/10.1186/s12866-022-02719-3 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Holtappels, D. Fortuna, K. J. Vallino, M. Lavigne, R. Wagemans, J. Isolation, characterization and genome analysis of an orphan phage FoX4 of the new Foxquatrovirus genus |
title | Isolation, characterization and genome analysis of an orphan phage FoX4 of the new Foxquatrovirus genus |
title_full | Isolation, characterization and genome analysis of an orphan phage FoX4 of the new Foxquatrovirus genus |
title_fullStr | Isolation, characterization and genome analysis of an orphan phage FoX4 of the new Foxquatrovirus genus |
title_full_unstemmed | Isolation, characterization and genome analysis of an orphan phage FoX4 of the new Foxquatrovirus genus |
title_short | Isolation, characterization and genome analysis of an orphan phage FoX4 of the new Foxquatrovirus genus |
title_sort | isolation, characterization and genome analysis of an orphan phage fox4 of the new foxquatrovirus genus |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9746216/ https://www.ncbi.nlm.nih.gov/pubmed/36513996 http://dx.doi.org/10.1186/s12866-022-02719-3 |
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