Cargando…

Novel biomarkers identifying hypertrophic cardiomyopathy and its obstructive variant based on targeted amino acid metabolomics

BACKGROUND: Hypertrophic cardiomyopathy (HCM) is an underdiagnosed genetic heart disease worldwide. The management and prognosis of obstructive HCM (HOCM) and non-obstructive HCM (HNCM) are quite different, but it also remains challenging to discriminate these two subtypes. HCM is characterized by d...

Descripción completa

Detalles Bibliográficos
Autores principales: Guo, Lanyan, Wang, Bo, Zhang, Fuyang, Gao, Chao, Hu, Guangyu, Zhou, Mengyao, Wang, Rutao, Zhao, Hang, Yan, Wenjun, Zhang, Ling, Ma, Zhiling, Yang, Weiping, Guo, Xiong, Huang, Chong, Cui, Zhe, Sun, Fangfang, Song, Dandan, Liu, Liwen, Tao, Ling
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Lippincott Williams & Wilkins 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9746752/
https://www.ncbi.nlm.nih.gov/pubmed/36156511
http://dx.doi.org/10.1097/CM9.0000000000002279
_version_ 1784849434463436800
author Guo, Lanyan
Wang, Bo
Zhang, Fuyang
Gao, Chao
Hu, Guangyu
Zhou, Mengyao
Wang, Rutao
Zhao, Hang
Yan, Wenjun
Zhang, Ling
Ma, Zhiling
Yang, Weiping
Guo, Xiong
Huang, Chong
Cui, Zhe
Sun, Fangfang
Song, Dandan
Liu, Liwen
Tao, Ling
author_facet Guo, Lanyan
Wang, Bo
Zhang, Fuyang
Gao, Chao
Hu, Guangyu
Zhou, Mengyao
Wang, Rutao
Zhao, Hang
Yan, Wenjun
Zhang, Ling
Ma, Zhiling
Yang, Weiping
Guo, Xiong
Huang, Chong
Cui, Zhe
Sun, Fangfang
Song, Dandan
Liu, Liwen
Tao, Ling
author_sort Guo, Lanyan
collection PubMed
description BACKGROUND: Hypertrophic cardiomyopathy (HCM) is an underdiagnosed genetic heart disease worldwide. The management and prognosis of obstructive HCM (HOCM) and non-obstructive HCM (HNCM) are quite different, but it also remains challenging to discriminate these two subtypes. HCM is characterized by dysmetabolism, and myocardial amino acid (AA) metabolism is robustly changed. The present study aimed to delineate plasma AA and derivatives profiles, and identify potential biomarkers for HCM. METHODS: Plasma samples from 166 participants, including 57 cases of HOCM, 52 cases of HNCM, and 57 normal controls (NCs), who first visited the International Cooperation Center for HCM, Xijing Hospital between December 2019 and September 2020, were collected and analyzed by high-performance liquid chromatography–mass spectrometry based on targeted AA metabolomics. Three separate classification algorithms, including random forest, support vector machine, and logistic regression, were applied for the identification of specific AA and derivatives compositions for HCM and the development of screening models to discriminate HCM from NC as well as HOCM from HNCM. RESULTS: The univariate analysis showed that the serine, glycine, proline, citrulline, glutamine, cystine, creatinine, cysteine, choline, and aminoadipic acid levels in the HCM group were significantly different from those in the NC group. Four AAs and derivatives (Panel A; proline, glycine, cysteine, and choline) were screened out by multiple feature selection algorithms for discriminating HCM patients from NCs. The receiver operating characteristic (ROC) analysis in Panel A yielded an area under the ROC curve (AUC) of 0.83 (0.75–0.91) in the training set and 0.79 (0.65–0.94) in the validation set. Moreover, among 10 AAs and derivatives (arginine, phenylalanine, tyrosine, proline, alanine, asparagine, creatine, tryptophan, ornithine, and choline) with statistical significance between HOCM and HNCM, 3 AAs (Panel B; arginine, proline, and ornithine) were selected to differentiate the two subgroups. The AUC values in the training and validation sets for Panel B were 0.83 (0.74–0.93) and 0.82 (0.66–0.98), respectively. CONCLUSIONS: The plasma AA and derivatives profiles were distinct between the HCM and NC groups. Based on the differential profiles, the two established screening models have potential value in assisting HCM screening and identifying whether it is obstructive.
format Online
Article
Text
id pubmed-9746752
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Lippincott Williams & Wilkins
record_format MEDLINE/PubMed
spelling pubmed-97467522022-12-16 Novel biomarkers identifying hypertrophic cardiomyopathy and its obstructive variant based on targeted amino acid metabolomics Guo, Lanyan Wang, Bo Zhang, Fuyang Gao, Chao Hu, Guangyu Zhou, Mengyao Wang, Rutao Zhao, Hang Yan, Wenjun Zhang, Ling Ma, Zhiling Yang, Weiping Guo, Xiong Huang, Chong Cui, Zhe Sun, Fangfang Song, Dandan Liu, Liwen Tao, Ling Chin Med J (Engl) Original Articles BACKGROUND: Hypertrophic cardiomyopathy (HCM) is an underdiagnosed genetic heart disease worldwide. The management and prognosis of obstructive HCM (HOCM) and non-obstructive HCM (HNCM) are quite different, but it also remains challenging to discriminate these two subtypes. HCM is characterized by dysmetabolism, and myocardial amino acid (AA) metabolism is robustly changed. The present study aimed to delineate plasma AA and derivatives profiles, and identify potential biomarkers for HCM. METHODS: Plasma samples from 166 participants, including 57 cases of HOCM, 52 cases of HNCM, and 57 normal controls (NCs), who first visited the International Cooperation Center for HCM, Xijing Hospital between December 2019 and September 2020, were collected and analyzed by high-performance liquid chromatography–mass spectrometry based on targeted AA metabolomics. Three separate classification algorithms, including random forest, support vector machine, and logistic regression, were applied for the identification of specific AA and derivatives compositions for HCM and the development of screening models to discriminate HCM from NC as well as HOCM from HNCM. RESULTS: The univariate analysis showed that the serine, glycine, proline, citrulline, glutamine, cystine, creatinine, cysteine, choline, and aminoadipic acid levels in the HCM group were significantly different from those in the NC group. Four AAs and derivatives (Panel A; proline, glycine, cysteine, and choline) were screened out by multiple feature selection algorithms for discriminating HCM patients from NCs. The receiver operating characteristic (ROC) analysis in Panel A yielded an area under the ROC curve (AUC) of 0.83 (0.75–0.91) in the training set and 0.79 (0.65–0.94) in the validation set. Moreover, among 10 AAs and derivatives (arginine, phenylalanine, tyrosine, proline, alanine, asparagine, creatine, tryptophan, ornithine, and choline) with statistical significance between HOCM and HNCM, 3 AAs (Panel B; arginine, proline, and ornithine) were selected to differentiate the two subgroups. The AUC values in the training and validation sets for Panel B were 0.83 (0.74–0.93) and 0.82 (0.66–0.98), respectively. CONCLUSIONS: The plasma AA and derivatives profiles were distinct between the HCM and NC groups. Based on the differential profiles, the two established screening models have potential value in assisting HCM screening and identifying whether it is obstructive. Lippincott Williams & Wilkins 2022-08-20 2022-09-26 /pmc/articles/PMC9746752/ /pubmed/36156511 http://dx.doi.org/10.1097/CM9.0000000000002279 Text en Copyright © 2022 The Chinese Medical Association, produced by Wolters Kluwer, Inc. under the CC-BY-NC-ND license. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution-Non Commercial-No Derivatives License 4.0 (CCBY-NC-ND), where it is permissible to download and share the work provided it is properly cited. The work cannot be changed in any way or used commercially without permission from the journal. http://creativecommons.org/licenses/by-nc-nd/4.0 (https://creativecommons.org/licenses/by-nc-nd/4.0/)
spellingShingle Original Articles
Guo, Lanyan
Wang, Bo
Zhang, Fuyang
Gao, Chao
Hu, Guangyu
Zhou, Mengyao
Wang, Rutao
Zhao, Hang
Yan, Wenjun
Zhang, Ling
Ma, Zhiling
Yang, Weiping
Guo, Xiong
Huang, Chong
Cui, Zhe
Sun, Fangfang
Song, Dandan
Liu, Liwen
Tao, Ling
Novel biomarkers identifying hypertrophic cardiomyopathy and its obstructive variant based on targeted amino acid metabolomics
title Novel biomarkers identifying hypertrophic cardiomyopathy and its obstructive variant based on targeted amino acid metabolomics
title_full Novel biomarkers identifying hypertrophic cardiomyopathy and its obstructive variant based on targeted amino acid metabolomics
title_fullStr Novel biomarkers identifying hypertrophic cardiomyopathy and its obstructive variant based on targeted amino acid metabolomics
title_full_unstemmed Novel biomarkers identifying hypertrophic cardiomyopathy and its obstructive variant based on targeted amino acid metabolomics
title_short Novel biomarkers identifying hypertrophic cardiomyopathy and its obstructive variant based on targeted amino acid metabolomics
title_sort novel biomarkers identifying hypertrophic cardiomyopathy and its obstructive variant based on targeted amino acid metabolomics
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9746752/
https://www.ncbi.nlm.nih.gov/pubmed/36156511
http://dx.doi.org/10.1097/CM9.0000000000002279
work_keys_str_mv AT guolanyan novelbiomarkersidentifyinghypertrophiccardiomyopathyanditsobstructivevariantbasedontargetedaminoacidmetabolomics
AT wangbo novelbiomarkersidentifyinghypertrophiccardiomyopathyanditsobstructivevariantbasedontargetedaminoacidmetabolomics
AT zhangfuyang novelbiomarkersidentifyinghypertrophiccardiomyopathyanditsobstructivevariantbasedontargetedaminoacidmetabolomics
AT gaochao novelbiomarkersidentifyinghypertrophiccardiomyopathyanditsobstructivevariantbasedontargetedaminoacidmetabolomics
AT huguangyu novelbiomarkersidentifyinghypertrophiccardiomyopathyanditsobstructivevariantbasedontargetedaminoacidmetabolomics
AT zhoumengyao novelbiomarkersidentifyinghypertrophiccardiomyopathyanditsobstructivevariantbasedontargetedaminoacidmetabolomics
AT wangrutao novelbiomarkersidentifyinghypertrophiccardiomyopathyanditsobstructivevariantbasedontargetedaminoacidmetabolomics
AT zhaohang novelbiomarkersidentifyinghypertrophiccardiomyopathyanditsobstructivevariantbasedontargetedaminoacidmetabolomics
AT yanwenjun novelbiomarkersidentifyinghypertrophiccardiomyopathyanditsobstructivevariantbasedontargetedaminoacidmetabolomics
AT zhangling novelbiomarkersidentifyinghypertrophiccardiomyopathyanditsobstructivevariantbasedontargetedaminoacidmetabolomics
AT mazhiling novelbiomarkersidentifyinghypertrophiccardiomyopathyanditsobstructivevariantbasedontargetedaminoacidmetabolomics
AT yangweiping novelbiomarkersidentifyinghypertrophiccardiomyopathyanditsobstructivevariantbasedontargetedaminoacidmetabolomics
AT guoxiong novelbiomarkersidentifyinghypertrophiccardiomyopathyanditsobstructivevariantbasedontargetedaminoacidmetabolomics
AT huangchong novelbiomarkersidentifyinghypertrophiccardiomyopathyanditsobstructivevariantbasedontargetedaminoacidmetabolomics
AT cuizhe novelbiomarkersidentifyinghypertrophiccardiomyopathyanditsobstructivevariantbasedontargetedaminoacidmetabolomics
AT sunfangfang novelbiomarkersidentifyinghypertrophiccardiomyopathyanditsobstructivevariantbasedontargetedaminoacidmetabolomics
AT songdandan novelbiomarkersidentifyinghypertrophiccardiomyopathyanditsobstructivevariantbasedontargetedaminoacidmetabolomics
AT liuliwen novelbiomarkersidentifyinghypertrophiccardiomyopathyanditsobstructivevariantbasedontargetedaminoacidmetabolomics
AT taoling novelbiomarkersidentifyinghypertrophiccardiomyopathyanditsobstructivevariantbasedontargetedaminoacidmetabolomics