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Genetic evaluation of hyperphenylalaninemia patients with tetrahydrobiopterin deficiency in Iranian population: Identification of four novel disease‐causing variants

BACKGROUND: Hyperphenylalaninemia (HPA) is the most common inborn error of amino acid metabolism worldwide. At least 2% of HPA cases are caused by a deficiency in tetrahydrobiopterin (BH4) metabolism. Genes such as QDPR and PTS are essential in the BH4 metabolism. This study aims to identify disease...

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Autores principales: Sadat Fatemi, Seyedeh Helia, Eshraghi, Peyman, Ghanei, Mahmoud, Hamzehloei, Tayebeh
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9747554/
https://www.ncbi.nlm.nih.gov/pubmed/36382472
http://dx.doi.org/10.1002/mgg3.2081
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author Sadat Fatemi, Seyedeh Helia
Eshraghi, Peyman
Ghanei, Mahmoud
Hamzehloei, Tayebeh
author_facet Sadat Fatemi, Seyedeh Helia
Eshraghi, Peyman
Ghanei, Mahmoud
Hamzehloei, Tayebeh
author_sort Sadat Fatemi, Seyedeh Helia
collection PubMed
description BACKGROUND: Hyperphenylalaninemia (HPA) is the most common inborn error of amino acid metabolism worldwide. At least 2% of HPA cases are caused by a deficiency in tetrahydrobiopterin (BH4) metabolism. Genes such as QDPR and PTS are essential in the BH4 metabolism. This study aims to identify disease‐causing variants in HPA patients, which may be helpful in genetic counseling and prenatal diagnosis. METHODS: A total of 10 HPA patients were enrolled in this study. The coding and adjacent intronic regions of PTS and QDPR genes were examined using Sanger sequencing. Protein modeling was also performed for novel identified variants. RESULTS: Ten patients and a total of 20 alleles were studied, which led to the identification of 10 different variants. All variants identified in PTS and QDPR were missense, except for the c.383_407del variant in the QDPR. Also, three novel variants were identified in the QDPR, including c.79G>T, c.383_407del and c.488G>A, and a novel variant, c.65C>G, in the PTS. CONCLUSIONS: Despite the genetic similarities in the disease‐causing variants, differences were observed in the Asian and European populations with our populations; As a result, similar but more extensive studies are needed to investigate the distribution of disease‐causing variants in genes involved in non‐PKU hyperphenylalaninemia.
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spelling pubmed-97475542022-12-14 Genetic evaluation of hyperphenylalaninemia patients with tetrahydrobiopterin deficiency in Iranian population: Identification of four novel disease‐causing variants Sadat Fatemi, Seyedeh Helia Eshraghi, Peyman Ghanei, Mahmoud Hamzehloei, Tayebeh Mol Genet Genomic Med Original Articles BACKGROUND: Hyperphenylalaninemia (HPA) is the most common inborn error of amino acid metabolism worldwide. At least 2% of HPA cases are caused by a deficiency in tetrahydrobiopterin (BH4) metabolism. Genes such as QDPR and PTS are essential in the BH4 metabolism. This study aims to identify disease‐causing variants in HPA patients, which may be helpful in genetic counseling and prenatal diagnosis. METHODS: A total of 10 HPA patients were enrolled in this study. The coding and adjacent intronic regions of PTS and QDPR genes were examined using Sanger sequencing. Protein modeling was also performed for novel identified variants. RESULTS: Ten patients and a total of 20 alleles were studied, which led to the identification of 10 different variants. All variants identified in PTS and QDPR were missense, except for the c.383_407del variant in the QDPR. Also, three novel variants were identified in the QDPR, including c.79G>T, c.383_407del and c.488G>A, and a novel variant, c.65C>G, in the PTS. CONCLUSIONS: Despite the genetic similarities in the disease‐causing variants, differences were observed in the Asian and European populations with our populations; As a result, similar but more extensive studies are needed to investigate the distribution of disease‐causing variants in genes involved in non‐PKU hyperphenylalaninemia. John Wiley and Sons Inc. 2022-11-16 /pmc/articles/PMC9747554/ /pubmed/36382472 http://dx.doi.org/10.1002/mgg3.2081 Text en © 2022 The Authors. Molecular Genetics & Genomic Medicine published by Wiley Periodicals LLC. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Articles
Sadat Fatemi, Seyedeh Helia
Eshraghi, Peyman
Ghanei, Mahmoud
Hamzehloei, Tayebeh
Genetic evaluation of hyperphenylalaninemia patients with tetrahydrobiopterin deficiency in Iranian population: Identification of four novel disease‐causing variants
title Genetic evaluation of hyperphenylalaninemia patients with tetrahydrobiopterin deficiency in Iranian population: Identification of four novel disease‐causing variants
title_full Genetic evaluation of hyperphenylalaninemia patients with tetrahydrobiopterin deficiency in Iranian population: Identification of four novel disease‐causing variants
title_fullStr Genetic evaluation of hyperphenylalaninemia patients with tetrahydrobiopterin deficiency in Iranian population: Identification of four novel disease‐causing variants
title_full_unstemmed Genetic evaluation of hyperphenylalaninemia patients with tetrahydrobiopterin deficiency in Iranian population: Identification of four novel disease‐causing variants
title_short Genetic evaluation of hyperphenylalaninemia patients with tetrahydrobiopterin deficiency in Iranian population: Identification of four novel disease‐causing variants
title_sort genetic evaluation of hyperphenylalaninemia patients with tetrahydrobiopterin deficiency in iranian population: identification of four novel disease‐causing variants
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9747554/
https://www.ncbi.nlm.nih.gov/pubmed/36382472
http://dx.doi.org/10.1002/mgg3.2081
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