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Identification of nine novel variants across PAX3 , SOX10 , EDNRB , and MITF genes in Waardenburg syndrome with next‐generation sequencing

BACKGROUND: Waardenburg syndrome (WS) is a hereditary, genetically heterogeneous disorder characterized by variable presentations of sensorineural hearing impairment and pigmentation anomalies. This study aimed to investigate the clinical features of WS in detail and determine the genetic causes of...

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Autores principales: Lee, Chen‐Yu, Lo, Ming‐Yu, Chen, You‐Mei, Lin, Pei‐Hsuan, Hsu, Chuan‐Jen, Chen, Pei‐Lung, Wu, Chen‐Chi, Hsu, Jacob Shujui
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9747560/
https://www.ncbi.nlm.nih.gov/pubmed/36331148
http://dx.doi.org/10.1002/mgg3.2082
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author Lee, Chen‐Yu
Lo, Ming‐Yu
Chen, You‐Mei
Lin, Pei‐Hsuan
Hsu, Chuan‐Jen
Chen, Pei‐Lung
Wu, Chen‐Chi
Hsu, Jacob Shujui
author_facet Lee, Chen‐Yu
Lo, Ming‐Yu
Chen, You‐Mei
Lin, Pei‐Hsuan
Hsu, Chuan‐Jen
Chen, Pei‐Lung
Wu, Chen‐Chi
Hsu, Jacob Shujui
author_sort Lee, Chen‐Yu
collection PubMed
description BACKGROUND: Waardenburg syndrome (WS) is a hereditary, genetically heterogeneous disorder characterized by variable presentations of sensorineural hearing impairment and pigmentation anomalies. This study aimed to investigate the clinical features of WS in detail and determine the genetic causes of patients with clinically suspected WS. METHODS: A total of 24 patients from 21 Han‐Taiwanese families were enrolled and underwent comprehensive physical and audiological examinations. We applied targeted next‐generation sequencing (NGS) to investigate the potential causative variants in these patients and further validated the candidate variants through Sanger sequencing. RESULTS: We identified 19 causative variants of WS in our cohort. Of these variants, nine were novel and discovered in PAX3, SOX10, EDNRB, and MITF genes, including missense, nonsense, deletion, and splice site variants. Several patients presented with skeletal deformities, hypotonia, megacolon, and neurological disorders that were rarely seen in WS. CONCLUSION: This study revealed highly phenotypic variability in Taiwanese WS patients and demonstrated that targeted NGS allowed us to clarify the genetic diagnosis and extend the genetic variant spectrum of WS.
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spelling pubmed-97475602022-12-14 Identification of nine novel variants across PAX3 , SOX10 , EDNRB , and MITF genes in Waardenburg syndrome with next‐generation sequencing Lee, Chen‐Yu Lo, Ming‐Yu Chen, You‐Mei Lin, Pei‐Hsuan Hsu, Chuan‐Jen Chen, Pei‐Lung Wu, Chen‐Chi Hsu, Jacob Shujui Mol Genet Genomic Med Original Articles BACKGROUND: Waardenburg syndrome (WS) is a hereditary, genetically heterogeneous disorder characterized by variable presentations of sensorineural hearing impairment and pigmentation anomalies. This study aimed to investigate the clinical features of WS in detail and determine the genetic causes of patients with clinically suspected WS. METHODS: A total of 24 patients from 21 Han‐Taiwanese families were enrolled and underwent comprehensive physical and audiological examinations. We applied targeted next‐generation sequencing (NGS) to investigate the potential causative variants in these patients and further validated the candidate variants through Sanger sequencing. RESULTS: We identified 19 causative variants of WS in our cohort. Of these variants, nine were novel and discovered in PAX3, SOX10, EDNRB, and MITF genes, including missense, nonsense, deletion, and splice site variants. Several patients presented with skeletal deformities, hypotonia, megacolon, and neurological disorders that were rarely seen in WS. CONCLUSION: This study revealed highly phenotypic variability in Taiwanese WS patients and demonstrated that targeted NGS allowed us to clarify the genetic diagnosis and extend the genetic variant spectrum of WS. John Wiley and Sons Inc. 2022-11-04 /pmc/articles/PMC9747560/ /pubmed/36331148 http://dx.doi.org/10.1002/mgg3.2082 Text en © 2022 The Authors. Molecular Genetics & Genomic Medicine published by Wiley Periodicals LLC. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.
spellingShingle Original Articles
Lee, Chen‐Yu
Lo, Ming‐Yu
Chen, You‐Mei
Lin, Pei‐Hsuan
Hsu, Chuan‐Jen
Chen, Pei‐Lung
Wu, Chen‐Chi
Hsu, Jacob Shujui
Identification of nine novel variants across PAX3 , SOX10 , EDNRB , and MITF genes in Waardenburg syndrome with next‐generation sequencing
title Identification of nine novel variants across PAX3 , SOX10 , EDNRB , and MITF genes in Waardenburg syndrome with next‐generation sequencing
title_full Identification of nine novel variants across PAX3 , SOX10 , EDNRB , and MITF genes in Waardenburg syndrome with next‐generation sequencing
title_fullStr Identification of nine novel variants across PAX3 , SOX10 , EDNRB , and MITF genes in Waardenburg syndrome with next‐generation sequencing
title_full_unstemmed Identification of nine novel variants across PAX3 , SOX10 , EDNRB , and MITF genes in Waardenburg syndrome with next‐generation sequencing
title_short Identification of nine novel variants across PAX3 , SOX10 , EDNRB , and MITF genes in Waardenburg syndrome with next‐generation sequencing
title_sort identification of nine novel variants across pax3 , sox10 , ednrb , and mitf genes in waardenburg syndrome with next‐generation sequencing
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9747560/
https://www.ncbi.nlm.nih.gov/pubmed/36331148
http://dx.doi.org/10.1002/mgg3.2082
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