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Selenate and selenite transporters in proso millet: Genome extensive detection and expression studies under salt stress and selenium

Crops are susceptible to a variety of stresses and amongst them salinity of soil is a global agronomic challenge that has a detrimental influence on crop yields, thus posing a severe danger to our food security. Therefore, it becomes imperative to examine how plants respond to salt stress, develop a...

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Autores principales: Mushtaq, Naveed Ul, Alghamdi, Khalid M., Saleem, Seerat, Shajar, Faamiya, Tahir, Inayatullah, Bahieldin, Ahmad, Rehman, Reiaz Ul, Hakeem, Khalid Rehman
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9748351/
https://www.ncbi.nlm.nih.gov/pubmed/36531352
http://dx.doi.org/10.3389/fpls.2022.1060154
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author Mushtaq, Naveed Ul
Alghamdi, Khalid M.
Saleem, Seerat
Shajar, Faamiya
Tahir, Inayatullah
Bahieldin, Ahmad
Rehman, Reiaz Ul
Hakeem, Khalid Rehman
author_facet Mushtaq, Naveed Ul
Alghamdi, Khalid M.
Saleem, Seerat
Shajar, Faamiya
Tahir, Inayatullah
Bahieldin, Ahmad
Rehman, Reiaz Ul
Hakeem, Khalid Rehman
author_sort Mushtaq, Naveed Ul
collection PubMed
description Crops are susceptible to a variety of stresses and amongst them salinity of soil is a global agronomic challenge that has a detrimental influence on crop yields, thus posing a severe danger to our food security. Therefore, it becomes imperative to examine how plants respond to salt stress, develop a tolerance that allows them to live through higher salt concentrations and choose species that can endure salt stress. From the perspective of food, security millets can be substituted to avoid hardships because of their efficiency in dealing with salt stress. Besides, this problem can also be tackled by using beneficial exogenous elements. Selenium (Se) which exists as selenate or selenite is one such cardinal element that has been reported to alleviate salt stress. The present study aimed for identification of selenate and selenite transporters in proso millet (Panicum miliaceum L.), their expression under NaCl (salt stress) and Na(2)SeO(3) (sodium selenite)treatments. This study identified eight transporters (RLM65282.1, RLN42222.1, RLN18407.1, RLM74477.1, RLN41904.1, RLN17428.1, RLN17268.1, RLM65753.1) that have a potential role in Se uptake in proso millet. We analyzed physicochemical properties, conserved structures, sub-cellular locations, chromosome location, molecular phylogenetic analysis, promoter regions prediction, protein-protein interactions, three-dimensional structure modeling and evaluation of these transporters. The analysis revealed the chromosome location and the number of amino acids present in these transporters as RLM65282.1 (16/646); RLN42222.1 (1/543); RLN18407.1 (2/483); RLM74477.1 (15/474); RLN41904.1 (1/521); RLN17428.1 (2/522); RLN17268.1(2/537);RLM65753.1 (16/539). The sub-cellular locations revealed that all the selenite transporters are located in plasma membrane whereas among selenate transporters RLM65282.1 and RLM74477.1 are located in mitochondria and RLN42222.1 and RLN18407.1 in chloroplast. The transcriptomic studies revealed that NaCl stress decreased the expression of both selenate and selenite transporters in proso millet and the applications of exogenous 1µM Se (Na(2)SeO(3)) increased the expression of these Se transporter genes. It was also revealed that selenate shows similar behavior as sulfate, while selenite transport resembles phosphate. Thus, it can be concluded that phosphate and sulphate transporters in millets are responsible for Se uptake.
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spelling pubmed-97483512022-12-15 Selenate and selenite transporters in proso millet: Genome extensive detection and expression studies under salt stress and selenium Mushtaq, Naveed Ul Alghamdi, Khalid M. Saleem, Seerat Shajar, Faamiya Tahir, Inayatullah Bahieldin, Ahmad Rehman, Reiaz Ul Hakeem, Khalid Rehman Front Plant Sci Plant Science Crops are susceptible to a variety of stresses and amongst them salinity of soil is a global agronomic challenge that has a detrimental influence on crop yields, thus posing a severe danger to our food security. Therefore, it becomes imperative to examine how plants respond to salt stress, develop a tolerance that allows them to live through higher salt concentrations and choose species that can endure salt stress. From the perspective of food, security millets can be substituted to avoid hardships because of their efficiency in dealing with salt stress. Besides, this problem can also be tackled by using beneficial exogenous elements. Selenium (Se) which exists as selenate or selenite is one such cardinal element that has been reported to alleviate salt stress. The present study aimed for identification of selenate and selenite transporters in proso millet (Panicum miliaceum L.), their expression under NaCl (salt stress) and Na(2)SeO(3) (sodium selenite)treatments. This study identified eight transporters (RLM65282.1, RLN42222.1, RLN18407.1, RLM74477.1, RLN41904.1, RLN17428.1, RLN17268.1, RLM65753.1) that have a potential role in Se uptake in proso millet. We analyzed physicochemical properties, conserved structures, sub-cellular locations, chromosome location, molecular phylogenetic analysis, promoter regions prediction, protein-protein interactions, three-dimensional structure modeling and evaluation of these transporters. The analysis revealed the chromosome location and the number of amino acids present in these transporters as RLM65282.1 (16/646); RLN42222.1 (1/543); RLN18407.1 (2/483); RLM74477.1 (15/474); RLN41904.1 (1/521); RLN17428.1 (2/522); RLN17268.1(2/537);RLM65753.1 (16/539). The sub-cellular locations revealed that all the selenite transporters are located in plasma membrane whereas among selenate transporters RLM65282.1 and RLM74477.1 are located in mitochondria and RLN42222.1 and RLN18407.1 in chloroplast. The transcriptomic studies revealed that NaCl stress decreased the expression of both selenate and selenite transporters in proso millet and the applications of exogenous 1µM Se (Na(2)SeO(3)) increased the expression of these Se transporter genes. It was also revealed that selenate shows similar behavior as sulfate, while selenite transport resembles phosphate. Thus, it can be concluded that phosphate and sulphate transporters in millets are responsible for Se uptake. Frontiers Media S.A. 2022-11-30 /pmc/articles/PMC9748351/ /pubmed/36531352 http://dx.doi.org/10.3389/fpls.2022.1060154 Text en Copyright © 2022 Mushtaq, Alghamdi, Saleem, Shajar, Tahir, Bahieldin, Rehman and Hakeem https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Plant Science
Mushtaq, Naveed Ul
Alghamdi, Khalid M.
Saleem, Seerat
Shajar, Faamiya
Tahir, Inayatullah
Bahieldin, Ahmad
Rehman, Reiaz Ul
Hakeem, Khalid Rehman
Selenate and selenite transporters in proso millet: Genome extensive detection and expression studies under salt stress and selenium
title Selenate and selenite transporters in proso millet: Genome extensive detection and expression studies under salt stress and selenium
title_full Selenate and selenite transporters in proso millet: Genome extensive detection and expression studies under salt stress and selenium
title_fullStr Selenate and selenite transporters in proso millet: Genome extensive detection and expression studies under salt stress and selenium
title_full_unstemmed Selenate and selenite transporters in proso millet: Genome extensive detection and expression studies under salt stress and selenium
title_short Selenate and selenite transporters in proso millet: Genome extensive detection and expression studies under salt stress and selenium
title_sort selenate and selenite transporters in proso millet: genome extensive detection and expression studies under salt stress and selenium
topic Plant Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9748351/
https://www.ncbi.nlm.nih.gov/pubmed/36531352
http://dx.doi.org/10.3389/fpls.2022.1060154
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