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Tailored Bayes: a risk modeling framework under unequal misclassification costs
Risk prediction models are a crucial tool in healthcare. Risk prediction models with a binary outcome (i.e., binary classification models) are often constructed using methodology which assumes the costs of different classification errors are equal. In many healthcare applications, this assumption is...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9748575/ https://www.ncbi.nlm.nih.gov/pubmed/34363680 http://dx.doi.org/10.1093/biostatistics/kxab023 |
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author | Karapanagiotis, Solon Benedetto, Umberto Mukherjee, Sach Kirk, Paul D W Newcombe, Paul J |
author_facet | Karapanagiotis, Solon Benedetto, Umberto Mukherjee, Sach Kirk, Paul D W Newcombe, Paul J |
author_sort | Karapanagiotis, Solon |
collection | PubMed |
description | Risk prediction models are a crucial tool in healthcare. Risk prediction models with a binary outcome (i.e., binary classification models) are often constructed using methodology which assumes the costs of different classification errors are equal. In many healthcare applications, this assumption is not valid, and the differences between misclassification costs can be quite large. For instance, in a diagnostic setting, the cost of misdiagnosing a person with a life-threatening disease as healthy may be larger than the cost of misdiagnosing a healthy person as a patient. In this article, we present Tailored Bayes (TB), a novel Bayesian inference framework which “tailors” model fitting to optimize predictive performance with respect to unbalanced misclassification costs. We use simulation studies to showcase when TB is expected to outperform standard Bayesian methods in the context of logistic regression. We then apply TB to three real-world applications, a cardiac surgery, a breast cancer prognostication task, and a breast cancer tumor classification task and demonstrate the improvement in predictive performance over standard methods. |
format | Online Article Text |
id | pubmed-9748575 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-97485752022-12-15 Tailored Bayes: a risk modeling framework under unequal misclassification costs Karapanagiotis, Solon Benedetto, Umberto Mukherjee, Sach Kirk, Paul D W Newcombe, Paul J Biostatistics Article Risk prediction models are a crucial tool in healthcare. Risk prediction models with a binary outcome (i.e., binary classification models) are often constructed using methodology which assumes the costs of different classification errors are equal. In many healthcare applications, this assumption is not valid, and the differences between misclassification costs can be quite large. For instance, in a diagnostic setting, the cost of misdiagnosing a person with a life-threatening disease as healthy may be larger than the cost of misdiagnosing a healthy person as a patient. In this article, we present Tailored Bayes (TB), a novel Bayesian inference framework which “tailors” model fitting to optimize predictive performance with respect to unbalanced misclassification costs. We use simulation studies to showcase when TB is expected to outperform standard Bayesian methods in the context of logistic regression. We then apply TB to three real-world applications, a cardiac surgery, a breast cancer prognostication task, and a breast cancer tumor classification task and demonstrate the improvement in predictive performance over standard methods. Oxford University Press 2021-08-07 /pmc/articles/PMC9748575/ /pubmed/34363680 http://dx.doi.org/10.1093/biostatistics/kxab023 Text en © The Author 2021. Published by Oxford University Press. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Article Karapanagiotis, Solon Benedetto, Umberto Mukherjee, Sach Kirk, Paul D W Newcombe, Paul J Tailored Bayes: a risk modeling framework under unequal misclassification costs |
title | Tailored Bayes: a risk modeling framework under unequal misclassification costs |
title_full | Tailored Bayes: a risk modeling framework under unequal misclassification costs |
title_fullStr | Tailored Bayes: a risk modeling framework under unequal misclassification costs |
title_full_unstemmed | Tailored Bayes: a risk modeling framework under unequal misclassification costs |
title_short | Tailored Bayes: a risk modeling framework under unequal misclassification costs |
title_sort | tailored bayes: a risk modeling framework under unequal misclassification costs |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9748575/ https://www.ncbi.nlm.nih.gov/pubmed/34363680 http://dx.doi.org/10.1093/biostatistics/kxab023 |
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