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Multi-scale pathology image texture signature is a prognostic factor for resectable lung adenocarcinoma: a multi-center, retrospective study
BACKGROUND: Tumor histomorphology analysis plays a crucial role in predicting the prognosis of resectable lung adenocarcinoma (LUAD). Computer-extracted image texture features have been previously shown to be correlated with outcome. However, a comprehensive, quantitative, and interpretable predicto...
Autores principales: | , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9749333/ https://www.ncbi.nlm.nih.gov/pubmed/36517832 http://dx.doi.org/10.1186/s12967-022-03777-x |
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author | Wang, Yumeng Pan, Xipeng Lin, Huan Han, Chu An, Yajun Qiu, Bingjiang Feng, Zhengyun Huang, Xiaomei Xu, Zeyan Shi, Zhenwei Chen, Xin Li, Bingbing Yan, Lixu Lu, Cheng Li, Zhenhui Cui, Yanfen Liu, Zaiyi Liu, Zhenbing |
author_facet | Wang, Yumeng Pan, Xipeng Lin, Huan Han, Chu An, Yajun Qiu, Bingjiang Feng, Zhengyun Huang, Xiaomei Xu, Zeyan Shi, Zhenwei Chen, Xin Li, Bingbing Yan, Lixu Lu, Cheng Li, Zhenhui Cui, Yanfen Liu, Zaiyi Liu, Zhenbing |
author_sort | Wang, Yumeng |
collection | PubMed |
description | BACKGROUND: Tumor histomorphology analysis plays a crucial role in predicting the prognosis of resectable lung adenocarcinoma (LUAD). Computer-extracted image texture features have been previously shown to be correlated with outcome. However, a comprehensive, quantitative, and interpretable predictor remains to be developed. METHODS: In this multi-center study, we included patients with resectable LUAD from four independent cohorts. An automated pipeline was designed for extracting texture features from the tumor region in hematoxylin and eosin (H&E)-stained whole slide images (WSIs) at multiple magnifications. A multi-scale pathology image texture signature (MPIS) was constructed with the discriminative texture features in terms of overall survival (OS) selected by the LASSO method. The prognostic value of MPIS for OS was evaluated through univariable and multivariable analysis in the discovery set (n = 111) and the three external validation sets (V(1), n = 115; V(2), n = 116; and V(3), n = 246). We constructed a Cox proportional hazards model incorporating clinicopathological variables and MPIS to assess whether MPIS could improve prognostic stratification. We also performed histo-genomics analysis to explore the associations between texture features and biological pathways. RESULTS: A set of eight texture features was selected to construct MPIS. In multivariable analysis, a higher MPIS was associated with significantly worse OS in the discovery set (HR 5.32, 95%CI 1.72–16.44; P = 0.0037) and the three external validation sets (V(1): HR 2.63, 95%CI 1.10–6.29, P = 0.0292; V(2): HR 2.99, 95%CI 1.34–6.66, P = 0.0075; V(3): HR 1.93, 95%CI 1.15–3.23, P = 0.0125). The model that integrated clinicopathological variables and MPIS had better discrimination for OS compared to the clinicopathological variables-based model in the discovery set (C-index, 0.837 vs. 0.798) and the three external validation sets (V(1): 0.704 vs. 0.679; V(2): 0.728 vs. 0.666; V(3): 0.696 vs. 0.669). Furthermore, the identified texture features were associated with biological pathways, such as cytokine activity, structural constituent of cytoskeleton, and extracellular matrix structural constituent. CONCLUSIONS: MPIS was an independent prognostic biomarker that was robust and interpretable. Integration of MPIS with clinicopathological variables improved prognostic stratification in resectable LUAD and might help enhance the quality of individualized postoperative care. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12967-022-03777-x. |
format | Online Article Text |
id | pubmed-9749333 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-97493332022-12-15 Multi-scale pathology image texture signature is a prognostic factor for resectable lung adenocarcinoma: a multi-center, retrospective study Wang, Yumeng Pan, Xipeng Lin, Huan Han, Chu An, Yajun Qiu, Bingjiang Feng, Zhengyun Huang, Xiaomei Xu, Zeyan Shi, Zhenwei Chen, Xin Li, Bingbing Yan, Lixu Lu, Cheng Li, Zhenhui Cui, Yanfen Liu, Zaiyi Liu, Zhenbing J Transl Med Research BACKGROUND: Tumor histomorphology analysis plays a crucial role in predicting the prognosis of resectable lung adenocarcinoma (LUAD). Computer-extracted image texture features have been previously shown to be correlated with outcome. However, a comprehensive, quantitative, and interpretable predictor remains to be developed. METHODS: In this multi-center study, we included patients with resectable LUAD from four independent cohorts. An automated pipeline was designed for extracting texture features from the tumor region in hematoxylin and eosin (H&E)-stained whole slide images (WSIs) at multiple magnifications. A multi-scale pathology image texture signature (MPIS) was constructed with the discriminative texture features in terms of overall survival (OS) selected by the LASSO method. The prognostic value of MPIS for OS was evaluated through univariable and multivariable analysis in the discovery set (n = 111) and the three external validation sets (V(1), n = 115; V(2), n = 116; and V(3), n = 246). We constructed a Cox proportional hazards model incorporating clinicopathological variables and MPIS to assess whether MPIS could improve prognostic stratification. We also performed histo-genomics analysis to explore the associations between texture features and biological pathways. RESULTS: A set of eight texture features was selected to construct MPIS. In multivariable analysis, a higher MPIS was associated with significantly worse OS in the discovery set (HR 5.32, 95%CI 1.72–16.44; P = 0.0037) and the three external validation sets (V(1): HR 2.63, 95%CI 1.10–6.29, P = 0.0292; V(2): HR 2.99, 95%CI 1.34–6.66, P = 0.0075; V(3): HR 1.93, 95%CI 1.15–3.23, P = 0.0125). The model that integrated clinicopathological variables and MPIS had better discrimination for OS compared to the clinicopathological variables-based model in the discovery set (C-index, 0.837 vs. 0.798) and the three external validation sets (V(1): 0.704 vs. 0.679; V(2): 0.728 vs. 0.666; V(3): 0.696 vs. 0.669). Furthermore, the identified texture features were associated with biological pathways, such as cytokine activity, structural constituent of cytoskeleton, and extracellular matrix structural constituent. CONCLUSIONS: MPIS was an independent prognostic biomarker that was robust and interpretable. Integration of MPIS with clinicopathological variables improved prognostic stratification in resectable LUAD and might help enhance the quality of individualized postoperative care. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12967-022-03777-x. BioMed Central 2022-12-14 /pmc/articles/PMC9749333/ /pubmed/36517832 http://dx.doi.org/10.1186/s12967-022-03777-x Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Wang, Yumeng Pan, Xipeng Lin, Huan Han, Chu An, Yajun Qiu, Bingjiang Feng, Zhengyun Huang, Xiaomei Xu, Zeyan Shi, Zhenwei Chen, Xin Li, Bingbing Yan, Lixu Lu, Cheng Li, Zhenhui Cui, Yanfen Liu, Zaiyi Liu, Zhenbing Multi-scale pathology image texture signature is a prognostic factor for resectable lung adenocarcinoma: a multi-center, retrospective study |
title | Multi-scale pathology image texture signature is a prognostic factor for resectable lung adenocarcinoma: a multi-center, retrospective study |
title_full | Multi-scale pathology image texture signature is a prognostic factor for resectable lung adenocarcinoma: a multi-center, retrospective study |
title_fullStr | Multi-scale pathology image texture signature is a prognostic factor for resectable lung adenocarcinoma: a multi-center, retrospective study |
title_full_unstemmed | Multi-scale pathology image texture signature is a prognostic factor for resectable lung adenocarcinoma: a multi-center, retrospective study |
title_short | Multi-scale pathology image texture signature is a prognostic factor for resectable lung adenocarcinoma: a multi-center, retrospective study |
title_sort | multi-scale pathology image texture signature is a prognostic factor for resectable lung adenocarcinoma: a multi-center, retrospective study |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9749333/ https://www.ncbi.nlm.nih.gov/pubmed/36517832 http://dx.doi.org/10.1186/s12967-022-03777-x |
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