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Novel estimates reveal subnational heterogeneities in disease-relevant contact patterns in the United States
Population contact patterns fundamentally determine the spread of directly transmitted airborne pathogens such as SARS-CoV-2 and influenza. Reliable quantitative estimates of contact patterns are therefore critical to modeling and reducing the spread of directly transmitted infectious diseases and t...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9749998/ https://www.ncbi.nlm.nih.gov/pubmed/36459512 http://dx.doi.org/10.1371/journal.pcbi.1010742 |
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author | Breen, Casey F. Mahmud, Ayesha S. Feehan, Dennis M. |
author_facet | Breen, Casey F. Mahmud, Ayesha S. Feehan, Dennis M. |
author_sort | Breen, Casey F. |
collection | PubMed |
description | Population contact patterns fundamentally determine the spread of directly transmitted airborne pathogens such as SARS-CoV-2 and influenza. Reliable quantitative estimates of contact patterns are therefore critical to modeling and reducing the spread of directly transmitted infectious diseases and to assessing the effectiveness of interventions intended to limit risky contacts. While many countries have used surveys and contact diaries to collect national-level contact data, local-level estimates of age-specific contact patterns remain rare. Yet, these local-level data are critical since disease dynamics and public health policy typically vary by geography. To overcome this challenge, we introduce a flexible model that can estimate age-specific contact patterns at the subnational level by combining national-level interpersonal contact data with other locality-specific data sources using multilevel regression with poststratification (MRP). We estimate daily contact matrices for all 50 US states and Washington DC from April 2020 to May 2021 using national contact data from the US. Our results reveal important state-level heterogeneities in levels and trends of contacts across the US over the course of the COVID-19 pandemic, with implications for the spread of respiratory diseases. |
format | Online Article Text |
id | pubmed-9749998 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-97499982022-12-15 Novel estimates reveal subnational heterogeneities in disease-relevant contact patterns in the United States Breen, Casey F. Mahmud, Ayesha S. Feehan, Dennis M. PLoS Comput Biol Research Article Population contact patterns fundamentally determine the spread of directly transmitted airborne pathogens such as SARS-CoV-2 and influenza. Reliable quantitative estimates of contact patterns are therefore critical to modeling and reducing the spread of directly transmitted infectious diseases and to assessing the effectiveness of interventions intended to limit risky contacts. While many countries have used surveys and contact diaries to collect national-level contact data, local-level estimates of age-specific contact patterns remain rare. Yet, these local-level data are critical since disease dynamics and public health policy typically vary by geography. To overcome this challenge, we introduce a flexible model that can estimate age-specific contact patterns at the subnational level by combining national-level interpersonal contact data with other locality-specific data sources using multilevel regression with poststratification (MRP). We estimate daily contact matrices for all 50 US states and Washington DC from April 2020 to May 2021 using national contact data from the US. Our results reveal important state-level heterogeneities in levels and trends of contacts across the US over the course of the COVID-19 pandemic, with implications for the spread of respiratory diseases. Public Library of Science 2022-12-02 /pmc/articles/PMC9749998/ /pubmed/36459512 http://dx.doi.org/10.1371/journal.pcbi.1010742 Text en © 2022 Breen et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Breen, Casey F. Mahmud, Ayesha S. Feehan, Dennis M. Novel estimates reveal subnational heterogeneities in disease-relevant contact patterns in the United States |
title | Novel estimates reveal subnational heterogeneities in disease-relevant contact patterns in the United States |
title_full | Novel estimates reveal subnational heterogeneities in disease-relevant contact patterns in the United States |
title_fullStr | Novel estimates reveal subnational heterogeneities in disease-relevant contact patterns in the United States |
title_full_unstemmed | Novel estimates reveal subnational heterogeneities in disease-relevant contact patterns in the United States |
title_short | Novel estimates reveal subnational heterogeneities in disease-relevant contact patterns in the United States |
title_sort | novel estimates reveal subnational heterogeneities in disease-relevant contact patterns in the united states |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9749998/ https://www.ncbi.nlm.nih.gov/pubmed/36459512 http://dx.doi.org/10.1371/journal.pcbi.1010742 |
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