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Novel estimates reveal subnational heterogeneities in disease-relevant contact patterns in the United States

Population contact patterns fundamentally determine the spread of directly transmitted airborne pathogens such as SARS-CoV-2 and influenza. Reliable quantitative estimates of contact patterns are therefore critical to modeling and reducing the spread of directly transmitted infectious diseases and t...

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Autores principales: Breen, Casey F., Mahmud, Ayesha S., Feehan, Dennis M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9749998/
https://www.ncbi.nlm.nih.gov/pubmed/36459512
http://dx.doi.org/10.1371/journal.pcbi.1010742
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author Breen, Casey F.
Mahmud, Ayesha S.
Feehan, Dennis M.
author_facet Breen, Casey F.
Mahmud, Ayesha S.
Feehan, Dennis M.
author_sort Breen, Casey F.
collection PubMed
description Population contact patterns fundamentally determine the spread of directly transmitted airborne pathogens such as SARS-CoV-2 and influenza. Reliable quantitative estimates of contact patterns are therefore critical to modeling and reducing the spread of directly transmitted infectious diseases and to assessing the effectiveness of interventions intended to limit risky contacts. While many countries have used surveys and contact diaries to collect national-level contact data, local-level estimates of age-specific contact patterns remain rare. Yet, these local-level data are critical since disease dynamics and public health policy typically vary by geography. To overcome this challenge, we introduce a flexible model that can estimate age-specific contact patterns at the subnational level by combining national-level interpersonal contact data with other locality-specific data sources using multilevel regression with poststratification (MRP). We estimate daily contact matrices for all 50 US states and Washington DC from April 2020 to May 2021 using national contact data from the US. Our results reveal important state-level heterogeneities in levels and trends of contacts across the US over the course of the COVID-19 pandemic, with implications for the spread of respiratory diseases.
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spelling pubmed-97499982022-12-15 Novel estimates reveal subnational heterogeneities in disease-relevant contact patterns in the United States Breen, Casey F. Mahmud, Ayesha S. Feehan, Dennis M. PLoS Comput Biol Research Article Population contact patterns fundamentally determine the spread of directly transmitted airborne pathogens such as SARS-CoV-2 and influenza. Reliable quantitative estimates of contact patterns are therefore critical to modeling and reducing the spread of directly transmitted infectious diseases and to assessing the effectiveness of interventions intended to limit risky contacts. While many countries have used surveys and contact diaries to collect national-level contact data, local-level estimates of age-specific contact patterns remain rare. Yet, these local-level data are critical since disease dynamics and public health policy typically vary by geography. To overcome this challenge, we introduce a flexible model that can estimate age-specific contact patterns at the subnational level by combining national-level interpersonal contact data with other locality-specific data sources using multilevel regression with poststratification (MRP). We estimate daily contact matrices for all 50 US states and Washington DC from April 2020 to May 2021 using national contact data from the US. Our results reveal important state-level heterogeneities in levels and trends of contacts across the US over the course of the COVID-19 pandemic, with implications for the spread of respiratory diseases. Public Library of Science 2022-12-02 /pmc/articles/PMC9749998/ /pubmed/36459512 http://dx.doi.org/10.1371/journal.pcbi.1010742 Text en © 2022 Breen et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Breen, Casey F.
Mahmud, Ayesha S.
Feehan, Dennis M.
Novel estimates reveal subnational heterogeneities in disease-relevant contact patterns in the United States
title Novel estimates reveal subnational heterogeneities in disease-relevant contact patterns in the United States
title_full Novel estimates reveal subnational heterogeneities in disease-relevant contact patterns in the United States
title_fullStr Novel estimates reveal subnational heterogeneities in disease-relevant contact patterns in the United States
title_full_unstemmed Novel estimates reveal subnational heterogeneities in disease-relevant contact patterns in the United States
title_short Novel estimates reveal subnational heterogeneities in disease-relevant contact patterns in the United States
title_sort novel estimates reveal subnational heterogeneities in disease-relevant contact patterns in the united states
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9749998/
https://www.ncbi.nlm.nih.gov/pubmed/36459512
http://dx.doi.org/10.1371/journal.pcbi.1010742
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