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Identification and verification of microRNA signature and key genes in the development of osteosarcoma with lung metastasis
Osteosarcoma (OS) is a heterogeneous malignant spindle cell tumor in children under the age of 20. This study aims to research the association between Solute Carrier Family 7 Member 8 (SLC7A8) as well as related genes and OS. METHOD: OS and normal samples (GSE38698 and GSE85537) were downloaded from...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Lippincott Williams & Wilkins
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9750666/ https://www.ncbi.nlm.nih.gov/pubmed/36626488 http://dx.doi.org/10.1097/MD.0000000000032258 |
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author | Meng, Fanjian Wang, Lulu Gao, Guangyu Chen, Jinpeng Wang, Xinghua Wu, Gaochen Miu, Yiqi |
author_facet | Meng, Fanjian Wang, Lulu Gao, Guangyu Chen, Jinpeng Wang, Xinghua Wu, Gaochen Miu, Yiqi |
author_sort | Meng, Fanjian |
collection | PubMed |
description | Osteosarcoma (OS) is a heterogeneous malignant spindle cell tumor in children under the age of 20. This study aims to research the association between Solute Carrier Family 7 Member 8 (SLC7A8) as well as related genes and OS. METHOD: OS and normal samples (GSE38698 and GSE85537) were downloaded from Gene Expression Omnibus dataset. The bioinformatics analysis was performed to distinguish 2 differentially expressed genes, prognostic candidate genes and functional enrichment pathway. Immunohistochemistry and quantitative real-time PCR were utilized for further study. RESULTS: There were 5 DEMs and 10 differentially expressed genes in cancer tissues compared to normal tissues. According to the km-plot software, ARHGEF3, BSN, PQLC3, and SLC7A8 were significantly related to the overall survival of patients with OS. Furthermore, Multivariate analysis included that SLC7A8 was independent risk factors for OS patients. Furthermore, immunohistochemistry and quantitative real-time PCR outcomes indicated that the expression level of SLC7A8 and hsa-miR-506 was differentially expressed in lung metastasis OS tissues and non-metastasis tissues. CONCLUSION: The prognostic model based on the miRNA-mRNA network could provide predictive significance for prognosis of OS patients, which would be worthy of clinical application. Our results concluded that SLC7A8 may play a key role in the development of OS. |
format | Online Article Text |
id | pubmed-9750666 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Lippincott Williams & Wilkins |
record_format | MEDLINE/PubMed |
spelling | pubmed-97506662022-12-28 Identification and verification of microRNA signature and key genes in the development of osteosarcoma with lung metastasis Meng, Fanjian Wang, Lulu Gao, Guangyu Chen, Jinpeng Wang, Xinghua Wu, Gaochen Miu, Yiqi Medicine (Baltimore) 4400 Osteosarcoma (OS) is a heterogeneous malignant spindle cell tumor in children under the age of 20. This study aims to research the association between Solute Carrier Family 7 Member 8 (SLC7A8) as well as related genes and OS. METHOD: OS and normal samples (GSE38698 and GSE85537) were downloaded from Gene Expression Omnibus dataset. The bioinformatics analysis was performed to distinguish 2 differentially expressed genes, prognostic candidate genes and functional enrichment pathway. Immunohistochemistry and quantitative real-time PCR were utilized for further study. RESULTS: There were 5 DEMs and 10 differentially expressed genes in cancer tissues compared to normal tissues. According to the km-plot software, ARHGEF3, BSN, PQLC3, and SLC7A8 were significantly related to the overall survival of patients with OS. Furthermore, Multivariate analysis included that SLC7A8 was independent risk factors for OS patients. Furthermore, immunohistochemistry and quantitative real-time PCR outcomes indicated that the expression level of SLC7A8 and hsa-miR-506 was differentially expressed in lung metastasis OS tissues and non-metastasis tissues. CONCLUSION: The prognostic model based on the miRNA-mRNA network could provide predictive significance for prognosis of OS patients, which would be worthy of clinical application. Our results concluded that SLC7A8 may play a key role in the development of OS. Lippincott Williams & Wilkins 2022-12-09 /pmc/articles/PMC9750666/ /pubmed/36626488 http://dx.doi.org/10.1097/MD.0000000000032258 Text en Copyright © 2022 the Author(s). Published by Wolters Kluwer Health, Inc. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License 4.0 (CCBY) (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | 4400 Meng, Fanjian Wang, Lulu Gao, Guangyu Chen, Jinpeng Wang, Xinghua Wu, Gaochen Miu, Yiqi Identification and verification of microRNA signature and key genes in the development of osteosarcoma with lung metastasis |
title | Identification and verification of microRNA signature and key genes in the development of osteosarcoma with lung metastasis |
title_full | Identification and verification of microRNA signature and key genes in the development of osteosarcoma with lung metastasis |
title_fullStr | Identification and verification of microRNA signature and key genes in the development of osteosarcoma with lung metastasis |
title_full_unstemmed | Identification and verification of microRNA signature and key genes in the development of osteosarcoma with lung metastasis |
title_short | Identification and verification of microRNA signature and key genes in the development of osteosarcoma with lung metastasis |
title_sort | identification and verification of microrna signature and key genes in the development of osteosarcoma with lung metastasis |
topic | 4400 |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9750666/ https://www.ncbi.nlm.nih.gov/pubmed/36626488 http://dx.doi.org/10.1097/MD.0000000000032258 |
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