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Whole-transcriptome analyses of sheep embryonic testicular cells infected with the bluetongue virus
INTRODUCTION: bluetongue virus (BTV) infection triggers dramatic and complex changes in the host's transcriptional profile to favor its own survival and reproduction. However, there is no whole-transcriptome study of susceptible animal cells with BTV infection, which impedes the in-depth and sy...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9751015/ https://www.ncbi.nlm.nih.gov/pubmed/36532076 http://dx.doi.org/10.3389/fimmu.2022.1053059 |
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author | Lu, Danfeng Li, Zhuoyue Zhu, Pei Yang, Zhenxing Yang, Heng Li, Zhanhong Li, Huachun Li, Zhuoran |
author_facet | Lu, Danfeng Li, Zhuoyue Zhu, Pei Yang, Zhenxing Yang, Heng Li, Zhanhong Li, Huachun Li, Zhuoran |
author_sort | Lu, Danfeng |
collection | PubMed |
description | INTRODUCTION: bluetongue virus (BTV) infection triggers dramatic and complex changes in the host's transcriptional profile to favor its own survival and reproduction. However, there is no whole-transcriptome study of susceptible animal cells with BTV infection, which impedes the in-depth and systematical understanding of the comprehensive characterization of BTV-host interactome, as well as BTV infection and pathogenic mechanisms. METHODS: to systematically understand these changes, we performed whole-transcriptome sequencing in BTV serotype 1 (BTV-1)-infected and mock-infected sheep embryonic testicular cells, and subsequently conducted bioinformatics differential analyses. RESULTS: there were 1504 differentially expressed mRNAs, 78 differentially expressed microRNAs, 872 differentially expressed long non-coding RNAs, and 59 differentially expressed circular RNAs identified in total. Annotation from the Gene Ontology, enrichment from the Kyoto Encyclopedia of Genes and Genomes, and construction of competing endogenous RNA networks revealed differentially expressed RNAs primarily related to virus-sensing and signaling transduction pathways, antiviral and immune responses, inflammation, and development and metabolism related pathways. Furthermore, a protein-protein interaction network analysis found that BTV may contribute to abnormal spermatogenesis by reducing steroid biosynthesis. Finally, real-time quantitative PCR and western blotting results showed that the expression trends of differentially expressed RNAs were consistent with the whole-transcriptome sequencing data. DISCUSSION: this study provides more insights of comprehensive characterization of BTV-host interactome, and BTV infection and pathogenic mechanisms. |
format | Online Article Text |
id | pubmed-9751015 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-97510152022-12-16 Whole-transcriptome analyses of sheep embryonic testicular cells infected with the bluetongue virus Lu, Danfeng Li, Zhuoyue Zhu, Pei Yang, Zhenxing Yang, Heng Li, Zhanhong Li, Huachun Li, Zhuoran Front Immunol Immunology INTRODUCTION: bluetongue virus (BTV) infection triggers dramatic and complex changes in the host's transcriptional profile to favor its own survival and reproduction. However, there is no whole-transcriptome study of susceptible animal cells with BTV infection, which impedes the in-depth and systematical understanding of the comprehensive characterization of BTV-host interactome, as well as BTV infection and pathogenic mechanisms. METHODS: to systematically understand these changes, we performed whole-transcriptome sequencing in BTV serotype 1 (BTV-1)-infected and mock-infected sheep embryonic testicular cells, and subsequently conducted bioinformatics differential analyses. RESULTS: there were 1504 differentially expressed mRNAs, 78 differentially expressed microRNAs, 872 differentially expressed long non-coding RNAs, and 59 differentially expressed circular RNAs identified in total. Annotation from the Gene Ontology, enrichment from the Kyoto Encyclopedia of Genes and Genomes, and construction of competing endogenous RNA networks revealed differentially expressed RNAs primarily related to virus-sensing and signaling transduction pathways, antiviral and immune responses, inflammation, and development and metabolism related pathways. Furthermore, a protein-protein interaction network analysis found that BTV may contribute to abnormal spermatogenesis by reducing steroid biosynthesis. Finally, real-time quantitative PCR and western blotting results showed that the expression trends of differentially expressed RNAs were consistent with the whole-transcriptome sequencing data. DISCUSSION: this study provides more insights of comprehensive characterization of BTV-host interactome, and BTV infection and pathogenic mechanisms. Frontiers Media S.A. 2022-12-01 /pmc/articles/PMC9751015/ /pubmed/36532076 http://dx.doi.org/10.3389/fimmu.2022.1053059 Text en Copyright © 2022 Lu, Li, Zhu, Yang, Yang, Li, Li and Li https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Immunology Lu, Danfeng Li, Zhuoyue Zhu, Pei Yang, Zhenxing Yang, Heng Li, Zhanhong Li, Huachun Li, Zhuoran Whole-transcriptome analyses of sheep embryonic testicular cells infected with the bluetongue virus |
title | Whole-transcriptome analyses of sheep embryonic testicular cells infected with the bluetongue virus |
title_full | Whole-transcriptome analyses of sheep embryonic testicular cells infected with the bluetongue virus |
title_fullStr | Whole-transcriptome analyses of sheep embryonic testicular cells infected with the bluetongue virus |
title_full_unstemmed | Whole-transcriptome analyses of sheep embryonic testicular cells infected with the bluetongue virus |
title_short | Whole-transcriptome analyses of sheep embryonic testicular cells infected with the bluetongue virus |
title_sort | whole-transcriptome analyses of sheep embryonic testicular cells infected with the bluetongue virus |
topic | Immunology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9751015/ https://www.ncbi.nlm.nih.gov/pubmed/36532076 http://dx.doi.org/10.3389/fimmu.2022.1053059 |
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