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149. Increasing Oxacillin Resistance of Staphylococcus lugdunensis Over Time, Utilizing Whole Genome Sequencing to Characterize Resistance

BACKGROUND: Staphylococcus lugdunensis (SL) is a coagulase negative staphylococci (CoNS) demonstrating more virulent pathogenicity compared to other CoNS. With implementation of rapid diagnostics such as multiplex PCR on blood culture and use of MALDI-TOF (MALDI), CoNS can now be routinely specifica...

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Autores principales: Constance, Kristin, Fukuta, Yuriko, Penner, Elizabeth, Lasco, Todd M, Wanger, Audrey, Hanson, Blake M, Nigo, Masayuki
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9751562/
http://dx.doi.org/10.1093/ofid/ofac492.227
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author Constance, Kristin
Fukuta, Yuriko
Penner, Elizabeth
Lasco, Todd M
Wanger, Audrey
Hanson, Blake M
Nigo, Masayuki
author_facet Constance, Kristin
Fukuta, Yuriko
Penner, Elizabeth
Lasco, Todd M
Wanger, Audrey
Hanson, Blake M
Nigo, Masayuki
author_sort Constance, Kristin
collection PubMed
description BACKGROUND: Staphylococcus lugdunensis (SL) is a coagulase negative staphylococci (CoNS) demonstrating more virulent pathogenicity compared to other CoNS. With implementation of rapid diagnostics such as multiplex PCR on blood culture and use of MALDI-TOF (MALDI), CoNS can now be routinely specifically identified as SL. We sought to describe the antibiotic susceptibility of SL over time, and to utilize whole genome sequencing (WGS) to identify the characteristics of oxacillin (OXA) resistant SL. METHODS: Retrospective review of all culture isolates positive for SL from two major hospital systems, Memorial Hermann Hospital System (MHHS) and Baylor St. Lukes Medical Center (BSLMC) in Houston, TX. MALDI was implemented in 2016 at BSLMC and 2019 at MHHS. MHHS utilizes Microscan®, and BSLMC utilizes Vitek2® for susceptibility testing. For this study, all duplicated isolates within a 2-week period were excluded. Six patient isolates, three OXA resistant and three susceptible, were sent for WGS and analysis. RESULTS: Between 2014 and 2021, 744 culture isolates were identified as SL, 325 from MHHS and 419 from BSLMC (Fig 1). An increasing trend was observed at MHHS over time, however this trend was not observed at BSLMC. 83.6% (622/744) of isolates were susceptible to OXA. An overall trend towards increasing resistance was observed over time (Fig 2). Six isolates, three OXA susceptible (S) and three resistant (R), were sent for WGS. The R isolates were found to share the same sequence type (ST3), and while they were not clonal, were closely related and all harbored an SCCmec cassette most closely related to SCCmec type IVg. [Figure: see text] [Figure: see text] CONCLUSION: In our study, an increasing number of isolates were identified at MHHS over time. This finding may be related to implementation of MALDI. Overall OXA susceptibility was lower than expected at 83.6%, when compared to a prior large-scale United States based study in 2017 demonstrating 95.3% susceptibility. This finding of developing resistance is concerning. While WGS analysis of R isolates did not demonstrate clonality, it did show close relation. This data may suggest expansion of an emerging lineage, however more isolates will need to be studied for conclusion given limited sample size. DISCLOSURES: All Authors: No reported disclosures.
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spelling pubmed-97515622022-12-16 149. Increasing Oxacillin Resistance of Staphylococcus lugdunensis Over Time, Utilizing Whole Genome Sequencing to Characterize Resistance Constance, Kristin Fukuta, Yuriko Penner, Elizabeth Lasco, Todd M Wanger, Audrey Hanson, Blake M Nigo, Masayuki Open Forum Infect Dis Abstracts BACKGROUND: Staphylococcus lugdunensis (SL) is a coagulase negative staphylococci (CoNS) demonstrating more virulent pathogenicity compared to other CoNS. With implementation of rapid diagnostics such as multiplex PCR on blood culture and use of MALDI-TOF (MALDI), CoNS can now be routinely specifically identified as SL. We sought to describe the antibiotic susceptibility of SL over time, and to utilize whole genome sequencing (WGS) to identify the characteristics of oxacillin (OXA) resistant SL. METHODS: Retrospective review of all culture isolates positive for SL from two major hospital systems, Memorial Hermann Hospital System (MHHS) and Baylor St. Lukes Medical Center (BSLMC) in Houston, TX. MALDI was implemented in 2016 at BSLMC and 2019 at MHHS. MHHS utilizes Microscan®, and BSLMC utilizes Vitek2® for susceptibility testing. For this study, all duplicated isolates within a 2-week period were excluded. Six patient isolates, three OXA resistant and three susceptible, were sent for WGS and analysis. RESULTS: Between 2014 and 2021, 744 culture isolates were identified as SL, 325 from MHHS and 419 from BSLMC (Fig 1). An increasing trend was observed at MHHS over time, however this trend was not observed at BSLMC. 83.6% (622/744) of isolates were susceptible to OXA. An overall trend towards increasing resistance was observed over time (Fig 2). Six isolates, three OXA susceptible (S) and three resistant (R), were sent for WGS. The R isolates were found to share the same sequence type (ST3), and while they were not clonal, were closely related and all harbored an SCCmec cassette most closely related to SCCmec type IVg. [Figure: see text] [Figure: see text] CONCLUSION: In our study, an increasing number of isolates were identified at MHHS over time. This finding may be related to implementation of MALDI. Overall OXA susceptibility was lower than expected at 83.6%, when compared to a prior large-scale United States based study in 2017 demonstrating 95.3% susceptibility. This finding of developing resistance is concerning. While WGS analysis of R isolates did not demonstrate clonality, it did show close relation. This data may suggest expansion of an emerging lineage, however more isolates will need to be studied for conclusion given limited sample size. DISCLOSURES: All Authors: No reported disclosures. Oxford University Press 2022-12-15 /pmc/articles/PMC9751562/ http://dx.doi.org/10.1093/ofid/ofac492.227 Text en © The Author(s) 2022. Published by Oxford University Press on behalf of Infectious Diseases Society of America. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Abstracts
Constance, Kristin
Fukuta, Yuriko
Penner, Elizabeth
Lasco, Todd M
Wanger, Audrey
Hanson, Blake M
Nigo, Masayuki
149. Increasing Oxacillin Resistance of Staphylococcus lugdunensis Over Time, Utilizing Whole Genome Sequencing to Characterize Resistance
title 149. Increasing Oxacillin Resistance of Staphylococcus lugdunensis Over Time, Utilizing Whole Genome Sequencing to Characterize Resistance
title_full 149. Increasing Oxacillin Resistance of Staphylococcus lugdunensis Over Time, Utilizing Whole Genome Sequencing to Characterize Resistance
title_fullStr 149. Increasing Oxacillin Resistance of Staphylococcus lugdunensis Over Time, Utilizing Whole Genome Sequencing to Characterize Resistance
title_full_unstemmed 149. Increasing Oxacillin Resistance of Staphylococcus lugdunensis Over Time, Utilizing Whole Genome Sequencing to Characterize Resistance
title_short 149. Increasing Oxacillin Resistance of Staphylococcus lugdunensis Over Time, Utilizing Whole Genome Sequencing to Characterize Resistance
title_sort 149. increasing oxacillin resistance of staphylococcus lugdunensis over time, utilizing whole genome sequencing to characterize resistance
topic Abstracts
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9751562/
http://dx.doi.org/10.1093/ofid/ofac492.227
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