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134. Characterization of circulating clinical multi-drug resistant and methicillin resistant Staphylococcus aureus isolates in Peru

BACKGROUND: Multi-drug resistant and methicillin resistant Staphylococcus aureus (MDR-SA and MRSA, respectively) constitute a significant threat to hospitalized patients. Surveillance for antibiotic resistance is needed in settings where over-the-counter antibiotic use is widespread to identify incr...

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Autores principales: Rojas, Jesús D, Canal, Enrique A, Bernal, Manuela M, Lizewski, Rhonda A, Rios, Paul A
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9752233/
http://dx.doi.org/10.1093/ofid/ofac492.212
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author Rojas, Jesús D
Canal, Enrique A
Bernal, Manuela M
Lizewski, Rhonda A
Rios, Paul A
author_facet Rojas, Jesús D
Canal, Enrique A
Bernal, Manuela M
Lizewski, Rhonda A
Rios, Paul A
author_sort Rojas, Jesús D
collection PubMed
description BACKGROUND: Multi-drug resistant and methicillin resistant Staphylococcus aureus (MDR-SA and MRSA, respectively) constitute a significant threat to hospitalized patients. Surveillance for antibiotic resistance is needed in settings where over-the-counter antibiotic use is widespread to identify increasing antibiotic resistance that limits treatment options of nosocomial infections. METHODS: We performed phenotypic and genotypic characterizations of MDR-SA prospectively obtained from hospitals in Lima, Peru between 2015 - 2018. We collected 3103 bacterial isolates from clinical specimens. Bacterial samples were identified by conventional microbiology and BD Phoenix, and antimicrobial susceptibility testing (AST) was performed by disc diffusion, E-test and BD Phoenix. Additionally, multiplex PCR detected mecA, femA, and lukS in MDR-SA isolates. We selected 80 S. aureus isolates that were resistant to ≥ 3 antimicrobial classes and/or resistant to oxacillin or cefoxitin for genomic characterization using an Illumina NextSeq 500 sequencer. RESULTS: Testing identified 232/3103 isolates as S. aureus, and 80/232 (34%) isolates were MDR-SA, resistant to up to nine different antimicrobial classes. We observed high proportions of resistance to aminopenicillins 80/80 (100%), macrolides 71/80 (89%), lincomycins 69/80 (86%), quinolones 66/80 (83%), aminoglycosides 38/46 (82%). Notably, 75/80 (94%) isolates were MRSA. Interestingly, AST revealed that 81% had inducible resistance to clindamycin. In contrast, all isolates were susceptible to vancomycin, linezolid, and daptomycin. Multiplex PCR revealed that 5% of isolates carried the lukS gene and the mecA gene. 76 % of the isolates carried a bifunctional aminoglycoside modifying enzyme and a aminoglycoside O-nucleotidyltransferase enzymes that confer resistance to aminoglycosides. We detected the ermA gene in 79% of the isolates. In silico multilocus sequence typing (MLST) assigned the sequence type 5 to 91.2% MRSA isolates with multiple high related clusters observed, indicating the possibility of nosocomial dissemination and possible outbreak events. CONCLUSION: Antibiotic pressure on the resistance patterns of S. aureus is evident in the high levels of resistance seen in these clinical isolates. DISCLOSURES: All Authors: No reported disclosures.
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spelling pubmed-97522332022-12-16 134. Characterization of circulating clinical multi-drug resistant and methicillin resistant Staphylococcus aureus isolates in Peru Rojas, Jesús D Canal, Enrique A Bernal, Manuela M Lizewski, Rhonda A Rios, Paul A Open Forum Infect Dis Abstracts BACKGROUND: Multi-drug resistant and methicillin resistant Staphylococcus aureus (MDR-SA and MRSA, respectively) constitute a significant threat to hospitalized patients. Surveillance for antibiotic resistance is needed in settings where over-the-counter antibiotic use is widespread to identify increasing antibiotic resistance that limits treatment options of nosocomial infections. METHODS: We performed phenotypic and genotypic characterizations of MDR-SA prospectively obtained from hospitals in Lima, Peru between 2015 - 2018. We collected 3103 bacterial isolates from clinical specimens. Bacterial samples were identified by conventional microbiology and BD Phoenix, and antimicrobial susceptibility testing (AST) was performed by disc diffusion, E-test and BD Phoenix. Additionally, multiplex PCR detected mecA, femA, and lukS in MDR-SA isolates. We selected 80 S. aureus isolates that were resistant to ≥ 3 antimicrobial classes and/or resistant to oxacillin or cefoxitin for genomic characterization using an Illumina NextSeq 500 sequencer. RESULTS: Testing identified 232/3103 isolates as S. aureus, and 80/232 (34%) isolates were MDR-SA, resistant to up to nine different antimicrobial classes. We observed high proportions of resistance to aminopenicillins 80/80 (100%), macrolides 71/80 (89%), lincomycins 69/80 (86%), quinolones 66/80 (83%), aminoglycosides 38/46 (82%). Notably, 75/80 (94%) isolates were MRSA. Interestingly, AST revealed that 81% had inducible resistance to clindamycin. In contrast, all isolates were susceptible to vancomycin, linezolid, and daptomycin. Multiplex PCR revealed that 5% of isolates carried the lukS gene and the mecA gene. 76 % of the isolates carried a bifunctional aminoglycoside modifying enzyme and a aminoglycoside O-nucleotidyltransferase enzymes that confer resistance to aminoglycosides. We detected the ermA gene in 79% of the isolates. In silico multilocus sequence typing (MLST) assigned the sequence type 5 to 91.2% MRSA isolates with multiple high related clusters observed, indicating the possibility of nosocomial dissemination and possible outbreak events. CONCLUSION: Antibiotic pressure on the resistance patterns of S. aureus is evident in the high levels of resistance seen in these clinical isolates. DISCLOSURES: All Authors: No reported disclosures. Oxford University Press 2022-12-15 /pmc/articles/PMC9752233/ http://dx.doi.org/10.1093/ofid/ofac492.212 Text en © The Author(s) 2022. Published by Oxford University Press on behalf of Infectious Diseases Society of America. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Abstracts
Rojas, Jesús D
Canal, Enrique A
Bernal, Manuela M
Lizewski, Rhonda A
Rios, Paul A
134. Characterization of circulating clinical multi-drug resistant and methicillin resistant Staphylococcus aureus isolates in Peru
title 134. Characterization of circulating clinical multi-drug resistant and methicillin resistant Staphylococcus aureus isolates in Peru
title_full 134. Characterization of circulating clinical multi-drug resistant and methicillin resistant Staphylococcus aureus isolates in Peru
title_fullStr 134. Characterization of circulating clinical multi-drug resistant and methicillin resistant Staphylococcus aureus isolates in Peru
title_full_unstemmed 134. Characterization of circulating clinical multi-drug resistant and methicillin resistant Staphylococcus aureus isolates in Peru
title_short 134. Characterization of circulating clinical multi-drug resistant and methicillin resistant Staphylococcus aureus isolates in Peru
title_sort 134. characterization of circulating clinical multi-drug resistant and methicillin resistant staphylococcus aureus isolates in peru
topic Abstracts
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9752233/
http://dx.doi.org/10.1093/ofid/ofac492.212
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