Cargando…

89. On-going impact of the SARS-CoV-2 pandemic on the evolution of carbapenemase-producing Enterobacterales in Ontario, Canada

BACKGROUND: The spread of carbapenemase-producing Enterobacterales (CPE) is global threat. Numerous outbreaks of CPE have been reported during the COVID-19 pandemic. We describe the impact of of the SARS-CoV-2 pandemic on the emergence of CPE in south-central Ontario, Canada. Incidence of clinical i...

Descripción completa

Detalles Bibliográficos
Autores principales: Mozafarihashjin, Mohammad, Jamal, Alainna J, Kandel, Christopher, Kohler, Philipp, Mataseje, Laura, Mulvey, Michael, Allen, Vanessa, Barker, Kevin R, Baqi, Mahin, Borgia, Sergio, Coleman, Brenda, Faheem, Amna, Farooqi, Lubna, Johnstone, Jennie, Katz, Kevin, Melano, Roberto, Muller, Matthew, Mubareka, Samira, Patel, Samir, Poutanen, Susan, Richardson, David, Li, Angel, Zhong, Zoe, McGeer, Allison
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9752332/
http://dx.doi.org/10.1093/ofid/ofac492.014
_version_ 1784850695921336320
author Mozafarihashjin, Mohammad
Jamal, Alainna J
Kandel, Christopher
Kohler, Philipp
Mataseje, Laura
Mulvey, Michael
Allen, Vanessa
Barker, Kevin R
Baqi, Mahin
Borgia, Sergio
Coleman, Brenda
Faheem, Amna
Farooqi, Lubna
Johnstone, Jennie
Katz, Kevin
Melano, Roberto
Muller, Matthew
Mubareka, Samira
Patel, Samir
Poutanen, Susan
Richardson, David
Li, Angel
Zhong, Zoe
McGeer, Allison
author_facet Mozafarihashjin, Mohammad
Jamal, Alainna J
Kandel, Christopher
Kohler, Philipp
Mataseje, Laura
Mulvey, Michael
Allen, Vanessa
Barker, Kevin R
Baqi, Mahin
Borgia, Sergio
Coleman, Brenda
Faheem, Amna
Farooqi, Lubna
Johnstone, Jennie
Katz, Kevin
Melano, Roberto
Muller, Matthew
Mubareka, Samira
Patel, Samir
Poutanen, Susan
Richardson, David
Li, Angel
Zhong, Zoe
McGeer, Allison
author_sort Mozafarihashjin, Mohammad
collection PubMed
description BACKGROUND: The spread of carbapenemase-producing Enterobacterales (CPE) is global threat. Numerous outbreaks of CPE have been reported during the COVID-19 pandemic. We describe the impact of of the SARS-CoV-2 pandemic on the emergence of CPE in south-central Ontario, Canada. Incidence of clinical isolates of CPE and isolates with different CPE genes in Toronto/Peel region, 2017–2021. [Figure: see text] The upper panel shows the incidence of patients with clinical isolates of CPE by year and quarter from q4 2007 to q1 2022. The lower panel shows the incidence of patients with clinical isolates with different carbapenemase genes by fiscal year during the same period. METHODS: TIBDN has performed population-based surveillance for CPE in Toronto/Peel region (pop 4.5M) from first identified isolate in 2007. All laboratories test/refer all carbapenem non-susceptible Enterobacterial isolates for identification of CPE. Hospital charts are reviewed and patients/physicians interviewed. Population data are obtained from Statistics Canada. RESULTS: From 10/2007 to 3/31/2022, 1367 persons colonized or infected with CPE were identified. Their median age was 68.7yrs (IQR 54–78yrs); 761 (56%) were male. 772 (56%) were colonized when first identified; 115 (8.4%) were bacteremic at identification or subsequently developed bacteremia. The most common organisms were E. coli (651, 48%), K. pneumoniae (436, 32%), Enterobacter spp. (146, 11%), Citrobacter spp (62, 5%); the most common genes were NDM±OXA-48 (722, 53%), OXA-48-like (341, 25%), KPC (225, 16%), VIM (44, 3%). The incidence of CPE infections increased steadily until 3/2020 then declined by 61% and remained stable until 3/2022 (Figure, upper panel). The decline was greater for E. coli (56% decrease), K. pneumoniae (62%) than for Enterobacter spp. (30%) and other species (19%). It occurred in all genes in 2020; however, KPC containing organisms increased again in 2021 (Figure, lower panel). CONCLUSION: The advent of the COVID-19 pandemic was associated with an immediate, substantial decline in the incidence of patients with CPE in our population area. This decline occurred in both isolates with genes usually occurring in cases imported from other countries, and in those usually occurring in cases associated with transmission within Canadian hospitals. Decreased travel and enhanced infection prevention and control in hospitals may both have contributed to reductions in CPE during the pandemic. DISCLOSURES: All Authors: No reported disclosures.
format Online
Article
Text
id pubmed-9752332
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Oxford University Press
record_format MEDLINE/PubMed
spelling pubmed-97523322022-12-16 89. On-going impact of the SARS-CoV-2 pandemic on the evolution of carbapenemase-producing Enterobacterales in Ontario, Canada Mozafarihashjin, Mohammad Jamal, Alainna J Kandel, Christopher Kohler, Philipp Mataseje, Laura Mulvey, Michael Allen, Vanessa Barker, Kevin R Baqi, Mahin Borgia, Sergio Coleman, Brenda Faheem, Amna Farooqi, Lubna Johnstone, Jennie Katz, Kevin Melano, Roberto Muller, Matthew Mubareka, Samira Patel, Samir Poutanen, Susan Richardson, David Li, Angel Zhong, Zoe McGeer, Allison Open Forum Infect Dis Abstracts BACKGROUND: The spread of carbapenemase-producing Enterobacterales (CPE) is global threat. Numerous outbreaks of CPE have been reported during the COVID-19 pandemic. We describe the impact of of the SARS-CoV-2 pandemic on the emergence of CPE in south-central Ontario, Canada. Incidence of clinical isolates of CPE and isolates with different CPE genes in Toronto/Peel region, 2017–2021. [Figure: see text] The upper panel shows the incidence of patients with clinical isolates of CPE by year and quarter from q4 2007 to q1 2022. The lower panel shows the incidence of patients with clinical isolates with different carbapenemase genes by fiscal year during the same period. METHODS: TIBDN has performed population-based surveillance for CPE in Toronto/Peel region (pop 4.5M) from first identified isolate in 2007. All laboratories test/refer all carbapenem non-susceptible Enterobacterial isolates for identification of CPE. Hospital charts are reviewed and patients/physicians interviewed. Population data are obtained from Statistics Canada. RESULTS: From 10/2007 to 3/31/2022, 1367 persons colonized or infected with CPE were identified. Their median age was 68.7yrs (IQR 54–78yrs); 761 (56%) were male. 772 (56%) were colonized when first identified; 115 (8.4%) were bacteremic at identification or subsequently developed bacteremia. The most common organisms were E. coli (651, 48%), K. pneumoniae (436, 32%), Enterobacter spp. (146, 11%), Citrobacter spp (62, 5%); the most common genes were NDM±OXA-48 (722, 53%), OXA-48-like (341, 25%), KPC (225, 16%), VIM (44, 3%). The incidence of CPE infections increased steadily until 3/2020 then declined by 61% and remained stable until 3/2022 (Figure, upper panel). The decline was greater for E. coli (56% decrease), K. pneumoniae (62%) than for Enterobacter spp. (30%) and other species (19%). It occurred in all genes in 2020; however, KPC containing organisms increased again in 2021 (Figure, lower panel). CONCLUSION: The advent of the COVID-19 pandemic was associated with an immediate, substantial decline in the incidence of patients with CPE in our population area. This decline occurred in both isolates with genes usually occurring in cases imported from other countries, and in those usually occurring in cases associated with transmission within Canadian hospitals. Decreased travel and enhanced infection prevention and control in hospitals may both have contributed to reductions in CPE during the pandemic. DISCLOSURES: All Authors: No reported disclosures. Oxford University Press 2022-12-15 /pmc/articles/PMC9752332/ http://dx.doi.org/10.1093/ofid/ofac492.014 Text en © The Author(s) 2022. Published by Oxford University Press on behalf of Infectious Diseases Society of America. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Abstracts
Mozafarihashjin, Mohammad
Jamal, Alainna J
Kandel, Christopher
Kohler, Philipp
Mataseje, Laura
Mulvey, Michael
Allen, Vanessa
Barker, Kevin R
Baqi, Mahin
Borgia, Sergio
Coleman, Brenda
Faheem, Amna
Farooqi, Lubna
Johnstone, Jennie
Katz, Kevin
Melano, Roberto
Muller, Matthew
Mubareka, Samira
Patel, Samir
Poutanen, Susan
Richardson, David
Li, Angel
Zhong, Zoe
McGeer, Allison
89. On-going impact of the SARS-CoV-2 pandemic on the evolution of carbapenemase-producing Enterobacterales in Ontario, Canada
title 89. On-going impact of the SARS-CoV-2 pandemic on the evolution of carbapenemase-producing Enterobacterales in Ontario, Canada
title_full 89. On-going impact of the SARS-CoV-2 pandemic on the evolution of carbapenemase-producing Enterobacterales in Ontario, Canada
title_fullStr 89. On-going impact of the SARS-CoV-2 pandemic on the evolution of carbapenemase-producing Enterobacterales in Ontario, Canada
title_full_unstemmed 89. On-going impact of the SARS-CoV-2 pandemic on the evolution of carbapenemase-producing Enterobacterales in Ontario, Canada
title_short 89. On-going impact of the SARS-CoV-2 pandemic on the evolution of carbapenemase-producing Enterobacterales in Ontario, Canada
title_sort 89. on-going impact of the sars-cov-2 pandemic on the evolution of carbapenemase-producing enterobacterales in ontario, canada
topic Abstracts
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9752332/
http://dx.doi.org/10.1093/ofid/ofac492.014
work_keys_str_mv AT mozafarihashjinmohammad 89ongoingimpactofthesarscov2pandemicontheevolutionofcarbapenemaseproducingenterobacteralesinontariocanada
AT jamalalainnaj 89ongoingimpactofthesarscov2pandemicontheevolutionofcarbapenemaseproducingenterobacteralesinontariocanada
AT kandelchristopher 89ongoingimpactofthesarscov2pandemicontheevolutionofcarbapenemaseproducingenterobacteralesinontariocanada
AT kohlerphilipp 89ongoingimpactofthesarscov2pandemicontheevolutionofcarbapenemaseproducingenterobacteralesinontariocanada
AT matasejelaura 89ongoingimpactofthesarscov2pandemicontheevolutionofcarbapenemaseproducingenterobacteralesinontariocanada
AT mulveymichael 89ongoingimpactofthesarscov2pandemicontheevolutionofcarbapenemaseproducingenterobacteralesinontariocanada
AT allenvanessa 89ongoingimpactofthesarscov2pandemicontheevolutionofcarbapenemaseproducingenterobacteralesinontariocanada
AT barkerkevinr 89ongoingimpactofthesarscov2pandemicontheevolutionofcarbapenemaseproducingenterobacteralesinontariocanada
AT baqimahin 89ongoingimpactofthesarscov2pandemicontheevolutionofcarbapenemaseproducingenterobacteralesinontariocanada
AT borgiasergio 89ongoingimpactofthesarscov2pandemicontheevolutionofcarbapenemaseproducingenterobacteralesinontariocanada
AT colemanbrenda 89ongoingimpactofthesarscov2pandemicontheevolutionofcarbapenemaseproducingenterobacteralesinontariocanada
AT faheemamna 89ongoingimpactofthesarscov2pandemicontheevolutionofcarbapenemaseproducingenterobacteralesinontariocanada
AT farooqilubna 89ongoingimpactofthesarscov2pandemicontheevolutionofcarbapenemaseproducingenterobacteralesinontariocanada
AT johnstonejennie 89ongoingimpactofthesarscov2pandemicontheevolutionofcarbapenemaseproducingenterobacteralesinontariocanada
AT katzkevin 89ongoingimpactofthesarscov2pandemicontheevolutionofcarbapenemaseproducingenterobacteralesinontariocanada
AT melanoroberto 89ongoingimpactofthesarscov2pandemicontheevolutionofcarbapenemaseproducingenterobacteralesinontariocanada
AT mullermatthew 89ongoingimpactofthesarscov2pandemicontheevolutionofcarbapenemaseproducingenterobacteralesinontariocanada
AT mubarekasamira 89ongoingimpactofthesarscov2pandemicontheevolutionofcarbapenemaseproducingenterobacteralesinontariocanada
AT patelsamir 89ongoingimpactofthesarscov2pandemicontheevolutionofcarbapenemaseproducingenterobacteralesinontariocanada
AT poutanensusan 89ongoingimpactofthesarscov2pandemicontheevolutionofcarbapenemaseproducingenterobacteralesinontariocanada
AT richardsondavid 89ongoingimpactofthesarscov2pandemicontheevolutionofcarbapenemaseproducingenterobacteralesinontariocanada
AT liangel 89ongoingimpactofthesarscov2pandemicontheevolutionofcarbapenemaseproducingenterobacteralesinontariocanada
AT zhongzoe 89ongoingimpactofthesarscov2pandemicontheevolutionofcarbapenemaseproducingenterobacteralesinontariocanada
AT mcgeerallison 89ongoingimpactofthesarscov2pandemicontheevolutionofcarbapenemaseproducingenterobacteralesinontariocanada