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1874. Comprehensive, longitudinal wastewater surveillance for SARS-CoV-2 across a university campus, demonstrates low levels of SARS-CoV-2 activity relative to the surrounding community

BACKGROUND: Universities are interactive communities where frequent contacts between individuals occur, increasing the risk of outbreaks of COVID-19. We embarked upon a real-time wastewater (WW) monitoring program across the University of Calgary (UofC) campus measuring WW SARS-CoV-2 burden relative...

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Autores principales: Lee, Jangwoo, Acosta, Nicole, Doorn, Jennifer Van, Low, Kashtin, Westlund, Paul, Chavarriaga, Maria Bautista, M. Waddell, Barbara Jean, Du, Kristine, McCalder, Janine, Pradhan, Puja, Sedaghat, Navid, Papparis, Chloe, Chen, Jianwei, Xiang, Kevin, Chan, Leslie, Vivas, Laura, Ruecker, Norma J, Webster, Brendan, Meddings, Jon, Achari, Gopal, Cathryn Ryan, M, Clark, Rhonda, Frankowski, Kevin, Hubert, Casey R J, Parkins, Michael
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9752603/
http://dx.doi.org/10.1093/ofid/ofac492.1501
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author Lee, Jangwoo
Acosta, Nicole
Doorn, Jennifer Van
Low, Kashtin
Westlund, Paul
Chavarriaga, Maria Bautista
M. Waddell, Barbara Jean
Du, Kristine
McCalder, Janine
Pradhan, Puja
Sedaghat, Navid
Papparis, Chloe
Chen, Jianwei
Xiang, Kevin
Chan, Leslie
Vivas, Laura
Ruecker, Norma J
Webster, Brendan
Meddings, Jon
Achari, Gopal
Cathryn Ryan, M
Clark, Rhonda
Frankowski, Kevin
Hubert, Casey R J
Parkins, Michael
author_facet Lee, Jangwoo
Acosta, Nicole
Doorn, Jennifer Van
Low, Kashtin
Westlund, Paul
Chavarriaga, Maria Bautista
M. Waddell, Barbara Jean
Du, Kristine
McCalder, Janine
Pradhan, Puja
Sedaghat, Navid
Papparis, Chloe
Chen, Jianwei
Xiang, Kevin
Chan, Leslie
Vivas, Laura
Ruecker, Norma J
Webster, Brendan
Meddings, Jon
Achari, Gopal
Cathryn Ryan, M
Clark, Rhonda
Frankowski, Kevin
Hubert, Casey R J
Parkins, Michael
author_sort Lee, Jangwoo
collection PubMed
description BACKGROUND: Universities are interactive communities where frequent contacts between individuals occur, increasing the risk of outbreaks of COVID-19. We embarked upon a real-time wastewater (WW) monitoring program across the University of Calgary (UofC) campus measuring WW SARS-CoV-2 burden relative to levels of disease in the broader surrounding community. [Figure: see text] The colour scheme shows 6 sewer sub-catchments at the University of Calgary. Autosamplers were deployed at 4 sampling nodes within sub-catchments CR and YA (both residence halls), and UCE and UCS (catchments that include several campus buildings). [Figure: see text] Log10-transformed abundance (i.e., copies per mL) of nucleocapsid gene (i.e., N1) for SARS-CoV-2 for each sampling location during October 2021 – April 2022. Locations denoted by the same letters (A, B, or C) show no statistical difference (p > 0.05) according to the Wilcoxon rank-sum test. The WWTP sample corresponds to a catchment area covering most of Calgary including the university campus, for which sampling locations CR, UCE, UCS, and UCW are defined in Fig. 1. METHODS: From October 2021 – April 2022, WW was collected thrice weekly across UofC campus through 4 individual sewer sampling nodes (Fig. 1) using autosamplers (C.E.C. Analytics, CA). Results from these 4 nodes were compared with community monitoring at Calgary’s largest WW treatment plant (WWTP), which received WW from surrounding neighborhoods, and also from UofC. Nucleic acid was extracted from WW for RTqPCR quantification of the N1 nucleocapside gene from SARS-CoV-2 genomic RNA. Qualitative (positive samples defined if cycle threshold < 40) and quantitative statistical analyses were performed using R. RESULTS: Levels of SARS-CoV-2 in WW were significantly lower at all campus monitoring sites relative to the WWTP (Wilcoxon rank-sum test p < 0.05; Fig. 2). The proportion of WW samples that were positive for SARS-CoV-2 was significantly higher for WWTP than at least two campus locations (p < 0.05 for Crowsnest Hall and UCE - University way and campus drive) according to Fischer’s exact 2-sided test. The proportion of WW samples with positive WW signals were still higher for WWTP than the other two locations, but statistically not significant (p = 0.216). Among campus locations, the buildings in UCE catchment showed much lower N1 signals than other catchments, likely owing to buildings in this catchment primarily being administration and classroom environments, with lower human-to-human contact and less defecation compared to the other 3 catchments, which include residence hall, a dining area, and/or laboratory spaces. CONCLUSION: Our results show that SARS-CoV-2 RNA shedding in WW at the UofC is significantly lower than the city-wide signal associated with surrounding neighborhoods. Furthermore, we demonstrate that WW testing at well-defined nodes is a sampling strategy for potentially locating specific places where high transmission of infectious disease occurs. DISCLOSURES: All Authors: No reported disclosures.
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spelling pubmed-97526032022-12-16 1874. Comprehensive, longitudinal wastewater surveillance for SARS-CoV-2 across a university campus, demonstrates low levels of SARS-CoV-2 activity relative to the surrounding community Lee, Jangwoo Acosta, Nicole Doorn, Jennifer Van Low, Kashtin Westlund, Paul Chavarriaga, Maria Bautista M. Waddell, Barbara Jean Du, Kristine McCalder, Janine Pradhan, Puja Sedaghat, Navid Papparis, Chloe Chen, Jianwei Xiang, Kevin Chan, Leslie Vivas, Laura Ruecker, Norma J Webster, Brendan Meddings, Jon Achari, Gopal Cathryn Ryan, M Clark, Rhonda Frankowski, Kevin Hubert, Casey R J Parkins, Michael Open Forum Infect Dis Abstracts BACKGROUND: Universities are interactive communities where frequent contacts between individuals occur, increasing the risk of outbreaks of COVID-19. We embarked upon a real-time wastewater (WW) monitoring program across the University of Calgary (UofC) campus measuring WW SARS-CoV-2 burden relative to levels of disease in the broader surrounding community. [Figure: see text] The colour scheme shows 6 sewer sub-catchments at the University of Calgary. Autosamplers were deployed at 4 sampling nodes within sub-catchments CR and YA (both residence halls), and UCE and UCS (catchments that include several campus buildings). [Figure: see text] Log10-transformed abundance (i.e., copies per mL) of nucleocapsid gene (i.e., N1) for SARS-CoV-2 for each sampling location during October 2021 – April 2022. Locations denoted by the same letters (A, B, or C) show no statistical difference (p > 0.05) according to the Wilcoxon rank-sum test. The WWTP sample corresponds to a catchment area covering most of Calgary including the university campus, for which sampling locations CR, UCE, UCS, and UCW are defined in Fig. 1. METHODS: From October 2021 – April 2022, WW was collected thrice weekly across UofC campus through 4 individual sewer sampling nodes (Fig. 1) using autosamplers (C.E.C. Analytics, CA). Results from these 4 nodes were compared with community monitoring at Calgary’s largest WW treatment plant (WWTP), which received WW from surrounding neighborhoods, and also from UofC. Nucleic acid was extracted from WW for RTqPCR quantification of the N1 nucleocapside gene from SARS-CoV-2 genomic RNA. Qualitative (positive samples defined if cycle threshold < 40) and quantitative statistical analyses were performed using R. RESULTS: Levels of SARS-CoV-2 in WW were significantly lower at all campus monitoring sites relative to the WWTP (Wilcoxon rank-sum test p < 0.05; Fig. 2). The proportion of WW samples that were positive for SARS-CoV-2 was significantly higher for WWTP than at least two campus locations (p < 0.05 for Crowsnest Hall and UCE - University way and campus drive) according to Fischer’s exact 2-sided test. The proportion of WW samples with positive WW signals were still higher for WWTP than the other two locations, but statistically not significant (p = 0.216). Among campus locations, the buildings in UCE catchment showed much lower N1 signals than other catchments, likely owing to buildings in this catchment primarily being administration and classroom environments, with lower human-to-human contact and less defecation compared to the other 3 catchments, which include residence hall, a dining area, and/or laboratory spaces. CONCLUSION: Our results show that SARS-CoV-2 RNA shedding in WW at the UofC is significantly lower than the city-wide signal associated with surrounding neighborhoods. Furthermore, we demonstrate that WW testing at well-defined nodes is a sampling strategy for potentially locating specific places where high transmission of infectious disease occurs. DISCLOSURES: All Authors: No reported disclosures. Oxford University Press 2022-12-15 /pmc/articles/PMC9752603/ http://dx.doi.org/10.1093/ofid/ofac492.1501 Text en © The Author(s) 2022. Published by Oxford University Press on behalf of Infectious Diseases Society of America. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Abstracts
Lee, Jangwoo
Acosta, Nicole
Doorn, Jennifer Van
Low, Kashtin
Westlund, Paul
Chavarriaga, Maria Bautista
M. Waddell, Barbara Jean
Du, Kristine
McCalder, Janine
Pradhan, Puja
Sedaghat, Navid
Papparis, Chloe
Chen, Jianwei
Xiang, Kevin
Chan, Leslie
Vivas, Laura
Ruecker, Norma J
Webster, Brendan
Meddings, Jon
Achari, Gopal
Cathryn Ryan, M
Clark, Rhonda
Frankowski, Kevin
Hubert, Casey R J
Parkins, Michael
1874. Comprehensive, longitudinal wastewater surveillance for SARS-CoV-2 across a university campus, demonstrates low levels of SARS-CoV-2 activity relative to the surrounding community
title 1874. Comprehensive, longitudinal wastewater surveillance for SARS-CoV-2 across a university campus, demonstrates low levels of SARS-CoV-2 activity relative to the surrounding community
title_full 1874. Comprehensive, longitudinal wastewater surveillance for SARS-CoV-2 across a university campus, demonstrates low levels of SARS-CoV-2 activity relative to the surrounding community
title_fullStr 1874. Comprehensive, longitudinal wastewater surveillance for SARS-CoV-2 across a university campus, demonstrates low levels of SARS-CoV-2 activity relative to the surrounding community
title_full_unstemmed 1874. Comprehensive, longitudinal wastewater surveillance for SARS-CoV-2 across a university campus, demonstrates low levels of SARS-CoV-2 activity relative to the surrounding community
title_short 1874. Comprehensive, longitudinal wastewater surveillance for SARS-CoV-2 across a university campus, demonstrates low levels of SARS-CoV-2 activity relative to the surrounding community
title_sort 1874. comprehensive, longitudinal wastewater surveillance for sars-cov-2 across a university campus, demonstrates low levels of sars-cov-2 activity relative to the surrounding community
topic Abstracts
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9752603/
http://dx.doi.org/10.1093/ofid/ofac492.1501
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