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What the Heck?—Automated Regioselectivity Calculations of Palladium-Catalyzed Heck Reactions Using Quantum Chemistry
[Image: see text] We present a quantum chemistry (QM)-based method that computes the relative energies of intermediates in the Heck reaction that relate to the regioselective reaction outcome: branched (α), linear (β), or a mix of the two. The calculations are done for two different reaction pathway...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9753166/ https://www.ncbi.nlm.nih.gov/pubmed/36530278 http://dx.doi.org/10.1021/acsomega.2c06378 |
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author | Ree, Nicolai Göller, Andreas H. Jensen, Jan H. |
author_facet | Ree, Nicolai Göller, Andreas H. Jensen, Jan H. |
author_sort | Ree, Nicolai |
collection | PubMed |
description | [Image: see text] We present a quantum chemistry (QM)-based method that computes the relative energies of intermediates in the Heck reaction that relate to the regioselective reaction outcome: branched (α), linear (β), or a mix of the two. The calculations are done for two different reaction pathways (neutral and cationic) and are based on r(2)SCAN-3c single-point calculations on GFN2-xTB geometries that, in turn, derive from a GFNFF-xTB conformational search. The method is completely automated and is sufficiently efficient to allow for the calculation of thousands of reaction outcomes. The method can mostly reproduce systematic experimental studies where the ratios of regioisomers are carefully determined. For a larger dataset extracted from Reaxys, the results are somewhat worse with accuracies of 63% for β-selectivity using the neutral pathway and 29% for α-selectivity using the cationic pathway. Our analysis of the dataset suggests that only the major or desired regioisomer is reported in the literature in many cases, which makes accurate comparisons difficult. The code is freely available on GitHub under the MIT open-source license: https://github.com/jensengroup/HeckQM. |
format | Online Article Text |
id | pubmed-9753166 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-97531662022-12-16 What the Heck?—Automated Regioselectivity Calculations of Palladium-Catalyzed Heck Reactions Using Quantum Chemistry Ree, Nicolai Göller, Andreas H. Jensen, Jan H. ACS Omega [Image: see text] We present a quantum chemistry (QM)-based method that computes the relative energies of intermediates in the Heck reaction that relate to the regioselective reaction outcome: branched (α), linear (β), or a mix of the two. The calculations are done for two different reaction pathways (neutral and cationic) and are based on r(2)SCAN-3c single-point calculations on GFN2-xTB geometries that, in turn, derive from a GFNFF-xTB conformational search. The method is completely automated and is sufficiently efficient to allow for the calculation of thousands of reaction outcomes. The method can mostly reproduce systematic experimental studies where the ratios of regioisomers are carefully determined. For a larger dataset extracted from Reaxys, the results are somewhat worse with accuracies of 63% for β-selectivity using the neutral pathway and 29% for α-selectivity using the cationic pathway. Our analysis of the dataset suggests that only the major or desired regioisomer is reported in the literature in many cases, which makes accurate comparisons difficult. The code is freely available on GitHub under the MIT open-source license: https://github.com/jensengroup/HeckQM. American Chemical Society 2022-12-02 /pmc/articles/PMC9753166/ /pubmed/36530278 http://dx.doi.org/10.1021/acsomega.2c06378 Text en © 2022 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Ree, Nicolai Göller, Andreas H. Jensen, Jan H. What the Heck?—Automated Regioselectivity Calculations of Palladium-Catalyzed Heck Reactions Using Quantum Chemistry |
title | What the Heck?—Automated
Regioselectivity Calculations
of Palladium-Catalyzed Heck Reactions Using Quantum Chemistry |
title_full | What the Heck?—Automated
Regioselectivity Calculations
of Palladium-Catalyzed Heck Reactions Using Quantum Chemistry |
title_fullStr | What the Heck?—Automated
Regioselectivity Calculations
of Palladium-Catalyzed Heck Reactions Using Quantum Chemistry |
title_full_unstemmed | What the Heck?—Automated
Regioselectivity Calculations
of Palladium-Catalyzed Heck Reactions Using Quantum Chemistry |
title_short | What the Heck?—Automated
Regioselectivity Calculations
of Palladium-Catalyzed Heck Reactions Using Quantum Chemistry |
title_sort | what the heck?—automated
regioselectivity calculations
of palladium-catalyzed heck reactions using quantum chemistry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9753166/ https://www.ncbi.nlm.nih.gov/pubmed/36530278 http://dx.doi.org/10.1021/acsomega.2c06378 |
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