Cargando…
Investigation of the Effect of Turn Residues on Tetrapeptide Aldol Catalysts with β-Turn Propensity
[Image: see text] Peptide catalysts for a wide diversity of reaction types contain a common motif—residues that bias the sequence toward β-turn secondary structure. In this work, we explore what role that secondary structure plays in the catalysis of aldol reactions for primary amine tetrapeptide al...
Autores principales: | , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2022
|
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9753199/ https://www.ncbi.nlm.nih.gov/pubmed/36530262 http://dx.doi.org/10.1021/acsomega.2c05921 |
_version_ | 1784850913409630208 |
---|---|
author | Liu, Albert Y. Calicdan, Xavier A. Glover, Gene N. Luo, Xue Barroso, Gage T. Hoppe, Brooke K. Boyle, Kelsey M. Witus, Leah S. |
author_facet | Liu, Albert Y. Calicdan, Xavier A. Glover, Gene N. Luo, Xue Barroso, Gage T. Hoppe, Brooke K. Boyle, Kelsey M. Witus, Leah S. |
author_sort | Liu, Albert Y. |
collection | PubMed |
description | [Image: see text] Peptide catalysts for a wide diversity of reaction types contain a common motif—residues that bias the sequence toward β-turn secondary structure. In this work, we explore what role that secondary structure plays in the catalysis of aldol reactions for primary amine tetrapeptide aldol catalysts. Using a lead tetrapeptide β-turn catalytic sequence, we varied the i + 1 and i + 2 residues to amino acids that would affect the β-turn propensity. We then studied the correlation between secondary structure, aldol rate enhancement, and stereoselectivity of the reaction between hydroxyacetone and 4-nitrobenzaldehyde. Using the i + 3 amide chemical shift as a measure of β-turn character, we found a rough correlation between the peptide structure and reaction kinetics but minimal effect on stereoselectivity. These trends may help aid the design of future catalytic sequences. |
format | Online Article Text |
id | pubmed-9753199 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-97531992022-12-16 Investigation of the Effect of Turn Residues on Tetrapeptide Aldol Catalysts with β-Turn Propensity Liu, Albert Y. Calicdan, Xavier A. Glover, Gene N. Luo, Xue Barroso, Gage T. Hoppe, Brooke K. Boyle, Kelsey M. Witus, Leah S. ACS Omega [Image: see text] Peptide catalysts for a wide diversity of reaction types contain a common motif—residues that bias the sequence toward β-turn secondary structure. In this work, we explore what role that secondary structure plays in the catalysis of aldol reactions for primary amine tetrapeptide aldol catalysts. Using a lead tetrapeptide β-turn catalytic sequence, we varied the i + 1 and i + 2 residues to amino acids that would affect the β-turn propensity. We then studied the correlation between secondary structure, aldol rate enhancement, and stereoselectivity of the reaction between hydroxyacetone and 4-nitrobenzaldehyde. Using the i + 3 amide chemical shift as a measure of β-turn character, we found a rough correlation between the peptide structure and reaction kinetics but minimal effect on stereoselectivity. These trends may help aid the design of future catalytic sequences. American Chemical Society 2022-12-01 /pmc/articles/PMC9753199/ /pubmed/36530262 http://dx.doi.org/10.1021/acsomega.2c05921 Text en © 2022 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by-nc-nd/4.0/Permits non-commercial access and re-use, provided that author attribution and integrity are maintained; but does not permit creation of adaptations or other derivative works (https://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Liu, Albert Y. Calicdan, Xavier A. Glover, Gene N. Luo, Xue Barroso, Gage T. Hoppe, Brooke K. Boyle, Kelsey M. Witus, Leah S. Investigation of the Effect of Turn Residues on Tetrapeptide Aldol Catalysts with β-Turn Propensity |
title | Investigation of
the Effect of Turn Residues on Tetrapeptide
Aldol Catalysts with β-Turn Propensity |
title_full | Investigation of
the Effect of Turn Residues on Tetrapeptide
Aldol Catalysts with β-Turn Propensity |
title_fullStr | Investigation of
the Effect of Turn Residues on Tetrapeptide
Aldol Catalysts with β-Turn Propensity |
title_full_unstemmed | Investigation of
the Effect of Turn Residues on Tetrapeptide
Aldol Catalysts with β-Turn Propensity |
title_short | Investigation of
the Effect of Turn Residues on Tetrapeptide
Aldol Catalysts with β-Turn Propensity |
title_sort | investigation of
the effect of turn residues on tetrapeptide
aldol catalysts with β-turn propensity |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9753199/ https://www.ncbi.nlm.nih.gov/pubmed/36530262 http://dx.doi.org/10.1021/acsomega.2c05921 |
work_keys_str_mv | AT liualberty investigationoftheeffectofturnresiduesontetrapeptidealdolcatalystswithbturnpropensity AT calicdanxaviera investigationoftheeffectofturnresiduesontetrapeptidealdolcatalystswithbturnpropensity AT glovergenen investigationoftheeffectofturnresiduesontetrapeptidealdolcatalystswithbturnpropensity AT luoxue investigationoftheeffectofturnresiduesontetrapeptidealdolcatalystswithbturnpropensity AT barrosogaget investigationoftheeffectofturnresiduesontetrapeptidealdolcatalystswithbturnpropensity AT hoppebrookek investigationoftheeffectofturnresiduesontetrapeptidealdolcatalystswithbturnpropensity AT boylekelseym investigationoftheeffectofturnresiduesontetrapeptidealdolcatalystswithbturnpropensity AT witusleahs investigationoftheeffectofturnresiduesontetrapeptidealdolcatalystswithbturnpropensity |