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Investigation of the Effect of Turn Residues on Tetrapeptide Aldol Catalysts with β-Turn Propensity

[Image: see text] Peptide catalysts for a wide diversity of reaction types contain a common motif—residues that bias the sequence toward β-turn secondary structure. In this work, we explore what role that secondary structure plays in the catalysis of aldol reactions for primary amine tetrapeptide al...

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Autores principales: Liu, Albert Y., Calicdan, Xavier A., Glover, Gene N., Luo, Xue, Barroso, Gage T., Hoppe, Brooke K., Boyle, Kelsey M., Witus, Leah S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2022
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9753199/
https://www.ncbi.nlm.nih.gov/pubmed/36530262
http://dx.doi.org/10.1021/acsomega.2c05921
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author Liu, Albert Y.
Calicdan, Xavier A.
Glover, Gene N.
Luo, Xue
Barroso, Gage T.
Hoppe, Brooke K.
Boyle, Kelsey M.
Witus, Leah S.
author_facet Liu, Albert Y.
Calicdan, Xavier A.
Glover, Gene N.
Luo, Xue
Barroso, Gage T.
Hoppe, Brooke K.
Boyle, Kelsey M.
Witus, Leah S.
author_sort Liu, Albert Y.
collection PubMed
description [Image: see text] Peptide catalysts for a wide diversity of reaction types contain a common motif—residues that bias the sequence toward β-turn secondary structure. In this work, we explore what role that secondary structure plays in the catalysis of aldol reactions for primary amine tetrapeptide aldol catalysts. Using a lead tetrapeptide β-turn catalytic sequence, we varied the i + 1 and i + 2 residues to amino acids that would affect the β-turn propensity. We then studied the correlation between secondary structure, aldol rate enhancement, and stereoselectivity of the reaction between hydroxyacetone and 4-nitrobenzaldehyde. Using the i + 3 amide chemical shift as a measure of β-turn character, we found a rough correlation between the peptide structure and reaction kinetics but minimal effect on stereoselectivity. These trends may help aid the design of future catalytic sequences.
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spelling pubmed-97531992022-12-16 Investigation of the Effect of Turn Residues on Tetrapeptide Aldol Catalysts with β-Turn Propensity Liu, Albert Y. Calicdan, Xavier A. Glover, Gene N. Luo, Xue Barroso, Gage T. Hoppe, Brooke K. Boyle, Kelsey M. Witus, Leah S. ACS Omega [Image: see text] Peptide catalysts for a wide diversity of reaction types contain a common motif—residues that bias the sequence toward β-turn secondary structure. In this work, we explore what role that secondary structure plays in the catalysis of aldol reactions for primary amine tetrapeptide aldol catalysts. Using a lead tetrapeptide β-turn catalytic sequence, we varied the i + 1 and i + 2 residues to amino acids that would affect the β-turn propensity. We then studied the correlation between secondary structure, aldol rate enhancement, and stereoselectivity of the reaction between hydroxyacetone and 4-nitrobenzaldehyde. Using the i + 3 amide chemical shift as a measure of β-turn character, we found a rough correlation between the peptide structure and reaction kinetics but minimal effect on stereoselectivity. These trends may help aid the design of future catalytic sequences. American Chemical Society 2022-12-01 /pmc/articles/PMC9753199/ /pubmed/36530262 http://dx.doi.org/10.1021/acsomega.2c05921 Text en © 2022 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by-nc-nd/4.0/Permits non-commercial access and re-use, provided that author attribution and integrity are maintained; but does not permit creation of adaptations or other derivative works (https://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Liu, Albert Y.
Calicdan, Xavier A.
Glover, Gene N.
Luo, Xue
Barroso, Gage T.
Hoppe, Brooke K.
Boyle, Kelsey M.
Witus, Leah S.
Investigation of the Effect of Turn Residues on Tetrapeptide Aldol Catalysts with β-Turn Propensity
title Investigation of the Effect of Turn Residues on Tetrapeptide Aldol Catalysts with β-Turn Propensity
title_full Investigation of the Effect of Turn Residues on Tetrapeptide Aldol Catalysts with β-Turn Propensity
title_fullStr Investigation of the Effect of Turn Residues on Tetrapeptide Aldol Catalysts with β-Turn Propensity
title_full_unstemmed Investigation of the Effect of Turn Residues on Tetrapeptide Aldol Catalysts with β-Turn Propensity
title_short Investigation of the Effect of Turn Residues on Tetrapeptide Aldol Catalysts with β-Turn Propensity
title_sort investigation of the effect of turn residues on tetrapeptide aldol catalysts with β-turn propensity
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9753199/
https://www.ncbi.nlm.nih.gov/pubmed/36530262
http://dx.doi.org/10.1021/acsomega.2c05921
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