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Alterations of long noncoding RNAs and mRNAs in extracellular vesicles derived from the murine heart post‐ischemia–reperfusion injury
Extracellular vesicles (EVs) play important roles in cardiovascular diseases by delivering their RNA cargos. However, the features and possible role of the lncRNAs and mRNAs in cardiac EVs during ischemia–reperfusion (IR) remain unclear. Therefore, we performed RNA sequencing analysis to profile the...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9753460/ https://www.ncbi.nlm.nih.gov/pubmed/36444487 http://dx.doi.org/10.1111/jcmm.17617 |
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author | Ge, Xinyu Meng, Qingshu Liu, Xuan Liu, Jing Ma, Xiaoxue Shi, Shanshan Li, Mimi Lin, Fang Liang, Xiaoting Gong, Xin Liu, Zhongmin Han, Wei Zhou, Xiaohui |
author_facet | Ge, Xinyu Meng, Qingshu Liu, Xuan Liu, Jing Ma, Xiaoxue Shi, Shanshan Li, Mimi Lin, Fang Liang, Xiaoting Gong, Xin Liu, Zhongmin Han, Wei Zhou, Xiaohui |
author_sort | Ge, Xinyu |
collection | PubMed |
description | Extracellular vesicles (EVs) play important roles in cardiovascular diseases by delivering their RNA cargos. However, the features and possible role of the lncRNAs and mRNAs in cardiac EVs during ischemia–reperfusion (IR) remain unclear. Therefore, we performed RNA sequencing analysis to profile the features of lncRNAs and mRNAs and predicted their potential functions. Here, we demonstrated that the severity of IR injury was significantly correlated with cardiac EV production. RNA sequencing identified 73 significantly differentially expressed (DE) lncRNAs (39 upregulated and 34 downregulated) and 720 DE‐mRNAs (317 upregulated and 403 downregulated). Gene Ontology (GO) and pathway analysis were performed to predict the potential functions of the DE‐lncRNAs and mRNAs. The lncRNA‐miRNA‐mRNA ceRNA network showed the possible functions of DE‐lncRNAs with DE‐mRNAs which are enriched in the pathways of T cell receptor signalling pathway and cell adhesion molecules. Moreover, the expressions of ENSMUST00000146010 and ENSMUST00000180630 were negatively correlated with the severity of IR injury. A significant positive correlation was revealed between TCONS_00010866 expression and the severity of the cardiac injury. These findings revealed the lncRNA and mRNA profiles in the heart derived EVs and provided potential targets and pathways involved in cardiac IR injury. |
format | Online Article Text |
id | pubmed-9753460 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-97534602022-12-19 Alterations of long noncoding RNAs and mRNAs in extracellular vesicles derived from the murine heart post‐ischemia–reperfusion injury Ge, Xinyu Meng, Qingshu Liu, Xuan Liu, Jing Ma, Xiaoxue Shi, Shanshan Li, Mimi Lin, Fang Liang, Xiaoting Gong, Xin Liu, Zhongmin Han, Wei Zhou, Xiaohui J Cell Mol Med Original Articles Extracellular vesicles (EVs) play important roles in cardiovascular diseases by delivering their RNA cargos. However, the features and possible role of the lncRNAs and mRNAs in cardiac EVs during ischemia–reperfusion (IR) remain unclear. Therefore, we performed RNA sequencing analysis to profile the features of lncRNAs and mRNAs and predicted their potential functions. Here, we demonstrated that the severity of IR injury was significantly correlated with cardiac EV production. RNA sequencing identified 73 significantly differentially expressed (DE) lncRNAs (39 upregulated and 34 downregulated) and 720 DE‐mRNAs (317 upregulated and 403 downregulated). Gene Ontology (GO) and pathway analysis were performed to predict the potential functions of the DE‐lncRNAs and mRNAs. The lncRNA‐miRNA‐mRNA ceRNA network showed the possible functions of DE‐lncRNAs with DE‐mRNAs which are enriched in the pathways of T cell receptor signalling pathway and cell adhesion molecules. Moreover, the expressions of ENSMUST00000146010 and ENSMUST00000180630 were negatively correlated with the severity of IR injury. A significant positive correlation was revealed between TCONS_00010866 expression and the severity of the cardiac injury. These findings revealed the lncRNA and mRNA profiles in the heart derived EVs and provided potential targets and pathways involved in cardiac IR injury. John Wiley and Sons Inc. 2022-11-28 2022-12 /pmc/articles/PMC9753460/ /pubmed/36444487 http://dx.doi.org/10.1111/jcmm.17617 Text en © 2022 The Authors. Journal of Cellular and Molecular Medicine published by Foundation for Cellular and Molecular Medicine and John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Articles Ge, Xinyu Meng, Qingshu Liu, Xuan Liu, Jing Ma, Xiaoxue Shi, Shanshan Li, Mimi Lin, Fang Liang, Xiaoting Gong, Xin Liu, Zhongmin Han, Wei Zhou, Xiaohui Alterations of long noncoding RNAs and mRNAs in extracellular vesicles derived from the murine heart post‐ischemia–reperfusion injury |
title | Alterations of long noncoding RNAs and mRNAs in extracellular vesicles derived from the murine heart post‐ischemia–reperfusion injury |
title_full | Alterations of long noncoding RNAs and mRNAs in extracellular vesicles derived from the murine heart post‐ischemia–reperfusion injury |
title_fullStr | Alterations of long noncoding RNAs and mRNAs in extracellular vesicles derived from the murine heart post‐ischemia–reperfusion injury |
title_full_unstemmed | Alterations of long noncoding RNAs and mRNAs in extracellular vesicles derived from the murine heart post‐ischemia–reperfusion injury |
title_short | Alterations of long noncoding RNAs and mRNAs in extracellular vesicles derived from the murine heart post‐ischemia–reperfusion injury |
title_sort | alterations of long noncoding rnas and mrnas in extracellular vesicles derived from the murine heart post‐ischemia–reperfusion injury |
topic | Original Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9753460/ https://www.ncbi.nlm.nih.gov/pubmed/36444487 http://dx.doi.org/10.1111/jcmm.17617 |
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