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A genetic correlation and bivariate genome-wide association study of grip strength and depression
Grip strength is an important biomarker reflecting muscle strength, and depression is a psychiatric disorder all over the world. Several studies found a significant inverse association between grip strength and depression, and there is also evidence for common physiological mechanisms between them....
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9754196/ https://www.ncbi.nlm.nih.gov/pubmed/36520780 http://dx.doi.org/10.1371/journal.pone.0278392 |
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author | Zhang, Tianhao Ji, Lujun Luo, Jia Wang, Weijing Tian, Xiaocao Duan, Haiping Xu, Chunsheng Zhang, Dongfeng |
author_facet | Zhang, Tianhao Ji, Lujun Luo, Jia Wang, Weijing Tian, Xiaocao Duan, Haiping Xu, Chunsheng Zhang, Dongfeng |
author_sort | Zhang, Tianhao |
collection | PubMed |
description | Grip strength is an important biomarker reflecting muscle strength, and depression is a psychiatric disorder all over the world. Several studies found a significant inverse association between grip strength and depression, and there is also evidence for common physiological mechanisms between them. We used twin data from Qingdao, China to calculate genetic correlations, and we performed a bivariate GWAS to explore potential SNPs, genes, and pathways in common between grip strength and depression. 139 pairs of Dizygotic twins were used for bivariate GWAS. VEAGSE2 and PASCAL software were used for gene-based analysis and pathway enrichment analysis, respectively. And the resulting SNPs were subjected to eQTL analysis and pleiotropy analysis. The genetic correlation coefficient between grip strength and depression was -0.41 (-0.96, -0.15). In SNP-based analysis, 7 SNPs exceeded the genome-wide significance level (P<5×10(−8)) and a total of 336 SNPs reached the level of suggestive significance (P<1×10(−5)). Gene-based analysis and pathway-based analysis identified genes and pathways related to muscle strength and the nervous system. The results of eQTL analysis were mainly enriched in tissues such as the brain, thyroid, and skeletal muscle. Pleiotropy analysis shows that 9 of the 15 top SNPs were associated with both grip strength and depression. In conclusion, this bivariate GWAS identified potentially common pleiotropic SNPs, genes, and pathways in grip strength and depression. |
format | Online Article Text |
id | pubmed-9754196 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-97541962022-12-16 A genetic correlation and bivariate genome-wide association study of grip strength and depression Zhang, Tianhao Ji, Lujun Luo, Jia Wang, Weijing Tian, Xiaocao Duan, Haiping Xu, Chunsheng Zhang, Dongfeng PLoS One Research Article Grip strength is an important biomarker reflecting muscle strength, and depression is a psychiatric disorder all over the world. Several studies found a significant inverse association between grip strength and depression, and there is also evidence for common physiological mechanisms between them. We used twin data from Qingdao, China to calculate genetic correlations, and we performed a bivariate GWAS to explore potential SNPs, genes, and pathways in common between grip strength and depression. 139 pairs of Dizygotic twins were used for bivariate GWAS. VEAGSE2 and PASCAL software were used for gene-based analysis and pathway enrichment analysis, respectively. And the resulting SNPs were subjected to eQTL analysis and pleiotropy analysis. The genetic correlation coefficient between grip strength and depression was -0.41 (-0.96, -0.15). In SNP-based analysis, 7 SNPs exceeded the genome-wide significance level (P<5×10(−8)) and a total of 336 SNPs reached the level of suggestive significance (P<1×10(−5)). Gene-based analysis and pathway-based analysis identified genes and pathways related to muscle strength and the nervous system. The results of eQTL analysis were mainly enriched in tissues such as the brain, thyroid, and skeletal muscle. Pleiotropy analysis shows that 9 of the 15 top SNPs were associated with both grip strength and depression. In conclusion, this bivariate GWAS identified potentially common pleiotropic SNPs, genes, and pathways in grip strength and depression. Public Library of Science 2022-12-15 /pmc/articles/PMC9754196/ /pubmed/36520780 http://dx.doi.org/10.1371/journal.pone.0278392 Text en © 2022 Zhang et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Zhang, Tianhao Ji, Lujun Luo, Jia Wang, Weijing Tian, Xiaocao Duan, Haiping Xu, Chunsheng Zhang, Dongfeng A genetic correlation and bivariate genome-wide association study of grip strength and depression |
title | A genetic correlation and bivariate genome-wide association study of grip strength and depression |
title_full | A genetic correlation and bivariate genome-wide association study of grip strength and depression |
title_fullStr | A genetic correlation and bivariate genome-wide association study of grip strength and depression |
title_full_unstemmed | A genetic correlation and bivariate genome-wide association study of grip strength and depression |
title_short | A genetic correlation and bivariate genome-wide association study of grip strength and depression |
title_sort | genetic correlation and bivariate genome-wide association study of grip strength and depression |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9754196/ https://www.ncbi.nlm.nih.gov/pubmed/36520780 http://dx.doi.org/10.1371/journal.pone.0278392 |
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