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Utility of adding Radiomics to clinical features in predicting the outcomes of radiotherapy for head and neck cancer using machine learning

BACKGROUND: Radiomics involves the extraction of quantitative information from annotated Computed-Tomography (CT) images, and has been used to predict outcomes in Head and Neck Squamous Cell Carcinoma (HNSCC). Subjecting combined Radiomics and Clinical features to Machine Learning (ML) could offer b...

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Autores principales: Gangil, Tarun, Sharan, Krishna, Rao, B. Dinesh, Palanisamy, Krishnamoorthy, Chakrabarti, Biswaroop, Kadavigere, Rajagopal
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9754241/
https://www.ncbi.nlm.nih.gov/pubmed/36520945
http://dx.doi.org/10.1371/journal.pone.0277168
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author Gangil, Tarun
Sharan, Krishna
Rao, B. Dinesh
Palanisamy, Krishnamoorthy
Chakrabarti, Biswaroop
Kadavigere, Rajagopal
author_facet Gangil, Tarun
Sharan, Krishna
Rao, B. Dinesh
Palanisamy, Krishnamoorthy
Chakrabarti, Biswaroop
Kadavigere, Rajagopal
author_sort Gangil, Tarun
collection PubMed
description BACKGROUND: Radiomics involves the extraction of quantitative information from annotated Computed-Tomography (CT) images, and has been used to predict outcomes in Head and Neck Squamous Cell Carcinoma (HNSCC). Subjecting combined Radiomics and Clinical features to Machine Learning (ML) could offer better predictions of clinical outcomes. This study is a comparative performance analysis of ML models with Clinical, Radiomics, and Clinico-Radiomic datasets for predicting four outcomes of HNSCC treated with Curative Radiation Therapy (RT): Distant Metastases, Locoregional Recurrence, New Primary, and Residual Disease. METHODOLOGY: The study used retrospective data of 311 HNSCC patients treated with radiotherapy between 2013–2018 at our centre. Binary prediction models were developed for the four outcomes with Clinical-only, Clinico-Radiomic, and Radiomics-only datasets, using three different ML classification algorithms namely, Random Forest (RF), Kernel Support Vector Machine (KSVM), and XGBoost. The best-performing ML algorithms of the three dataset groups was then compared. RESULTS: The Clinico-Radiomic dataset using KSVM classifier provided the best prediction. Predicted mean testing accuracy for Distant Metastases, Locoregional Recurrence, New Primary, and Residual Disease was 97%, 72%, 99%, and 96%, respectively. The mean area under the receiver operating curve (AUC) was calculated and displayed for all the models using three dataset groups. CONCLUSION: Clinico-Radiomic dataset improved the predictive ability of ML models over clinical features alone, while models built using Radiomics performed poorly. Radiomics data could therefore effectively supplement clinical data in predicting outcomes.
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spelling pubmed-97542412022-12-16 Utility of adding Radiomics to clinical features in predicting the outcomes of radiotherapy for head and neck cancer using machine learning Gangil, Tarun Sharan, Krishna Rao, B. Dinesh Palanisamy, Krishnamoorthy Chakrabarti, Biswaroop Kadavigere, Rajagopal PLoS One Research Article BACKGROUND: Radiomics involves the extraction of quantitative information from annotated Computed-Tomography (CT) images, and has been used to predict outcomes in Head and Neck Squamous Cell Carcinoma (HNSCC). Subjecting combined Radiomics and Clinical features to Machine Learning (ML) could offer better predictions of clinical outcomes. This study is a comparative performance analysis of ML models with Clinical, Radiomics, and Clinico-Radiomic datasets for predicting four outcomes of HNSCC treated with Curative Radiation Therapy (RT): Distant Metastases, Locoregional Recurrence, New Primary, and Residual Disease. METHODOLOGY: The study used retrospective data of 311 HNSCC patients treated with radiotherapy between 2013–2018 at our centre. Binary prediction models were developed for the four outcomes with Clinical-only, Clinico-Radiomic, and Radiomics-only datasets, using three different ML classification algorithms namely, Random Forest (RF), Kernel Support Vector Machine (KSVM), and XGBoost. The best-performing ML algorithms of the three dataset groups was then compared. RESULTS: The Clinico-Radiomic dataset using KSVM classifier provided the best prediction. Predicted mean testing accuracy for Distant Metastases, Locoregional Recurrence, New Primary, and Residual Disease was 97%, 72%, 99%, and 96%, respectively. The mean area under the receiver operating curve (AUC) was calculated and displayed for all the models using three dataset groups. CONCLUSION: Clinico-Radiomic dataset improved the predictive ability of ML models over clinical features alone, while models built using Radiomics performed poorly. Radiomics data could therefore effectively supplement clinical data in predicting outcomes. Public Library of Science 2022-12-15 /pmc/articles/PMC9754241/ /pubmed/36520945 http://dx.doi.org/10.1371/journal.pone.0277168 Text en © 2022 Gangil et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Gangil, Tarun
Sharan, Krishna
Rao, B. Dinesh
Palanisamy, Krishnamoorthy
Chakrabarti, Biswaroop
Kadavigere, Rajagopal
Utility of adding Radiomics to clinical features in predicting the outcomes of radiotherapy for head and neck cancer using machine learning
title Utility of adding Radiomics to clinical features in predicting the outcomes of radiotherapy for head and neck cancer using machine learning
title_full Utility of adding Radiomics to clinical features in predicting the outcomes of radiotherapy for head and neck cancer using machine learning
title_fullStr Utility of adding Radiomics to clinical features in predicting the outcomes of radiotherapy for head and neck cancer using machine learning
title_full_unstemmed Utility of adding Radiomics to clinical features in predicting the outcomes of radiotherapy for head and neck cancer using machine learning
title_short Utility of adding Radiomics to clinical features in predicting the outcomes of radiotherapy for head and neck cancer using machine learning
title_sort utility of adding radiomics to clinical features in predicting the outcomes of radiotherapy for head and neck cancer using machine learning
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9754241/
https://www.ncbi.nlm.nih.gov/pubmed/36520945
http://dx.doi.org/10.1371/journal.pone.0277168
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