Cargando…

clusTransition: An R package for monitoring transition in cluster solutions of temporal datasets

Clustering analysis’ primary purpose is to divide a dataset into a finite number of segments based on the similarities between items. In recent years, a significant amount of study has focused on the spatio-temporal aspects of clustering. However, clusters are no longer regarded as static objects si...

Descripción completa

Detalles Bibliográficos
Autores principales: Atif, Muhammad, Leisch, Friedrich
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9754593/
https://www.ncbi.nlm.nih.gov/pubmed/36520935
http://dx.doi.org/10.1371/journal.pone.0278146
_version_ 1784851234179514368
author Atif, Muhammad
Leisch, Friedrich
author_facet Atif, Muhammad
Leisch, Friedrich
author_sort Atif, Muhammad
collection PubMed
description Clustering analysis’ primary purpose is to divide a dataset into a finite number of segments based on the similarities between items. In recent years, a significant amount of study has focused on the spatio-temporal aspects of clustering. However, clusters are no longer regarded as static objects since changes influence them in the underlying population. This paper describes an R package implementing the MONIC framework for tracing the evolution of clusters extracted from temporal datasets. The name of the package is clusTransition, which stands for Cluster Transition. The algorithm is based on re-clustering cumulative datasets that evolve at successive time-points and monitoring the transitions experienced by the clusters in these clustering solutions. This paper’s contribution is to demonstrate how the package clusTransition is developed in the R programming language, and its workflow is discussed using hypothetical and real-life datasets.
format Online
Article
Text
id pubmed-9754593
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-97545932022-12-16 clusTransition: An R package for monitoring transition in cluster solutions of temporal datasets Atif, Muhammad Leisch, Friedrich PLoS One Research Article Clustering analysis’ primary purpose is to divide a dataset into a finite number of segments based on the similarities between items. In recent years, a significant amount of study has focused on the spatio-temporal aspects of clustering. However, clusters are no longer regarded as static objects since changes influence them in the underlying population. This paper describes an R package implementing the MONIC framework for tracing the evolution of clusters extracted from temporal datasets. The name of the package is clusTransition, which stands for Cluster Transition. The algorithm is based on re-clustering cumulative datasets that evolve at successive time-points and monitoring the transitions experienced by the clusters in these clustering solutions. This paper’s contribution is to demonstrate how the package clusTransition is developed in the R programming language, and its workflow is discussed using hypothetical and real-life datasets. Public Library of Science 2022-12-15 /pmc/articles/PMC9754593/ /pubmed/36520935 http://dx.doi.org/10.1371/journal.pone.0278146 Text en © 2022 Atif, Leisch https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Atif, Muhammad
Leisch, Friedrich
clusTransition: An R package for monitoring transition in cluster solutions of temporal datasets
title clusTransition: An R package for monitoring transition in cluster solutions of temporal datasets
title_full clusTransition: An R package for monitoring transition in cluster solutions of temporal datasets
title_fullStr clusTransition: An R package for monitoring transition in cluster solutions of temporal datasets
title_full_unstemmed clusTransition: An R package for monitoring transition in cluster solutions of temporal datasets
title_short clusTransition: An R package for monitoring transition in cluster solutions of temporal datasets
title_sort clustransition: an r package for monitoring transition in cluster solutions of temporal datasets
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9754593/
https://www.ncbi.nlm.nih.gov/pubmed/36520935
http://dx.doi.org/10.1371/journal.pone.0278146
work_keys_str_mv AT atifmuhammad clustransitionanrpackageformonitoringtransitioninclustersolutionsoftemporaldatasets
AT leischfriedrich clustransitionanrpackageformonitoringtransitioninclustersolutionsoftemporaldatasets