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Sparse inference and active learning of stochastic differential equations from data

Automatic machine learning of empirical models from experimental data has recently become possible as a result of increased availability of computational power and dedicated algorithms. Despite the successes of non-parametric inference and neural-network-based inference for empirical modelling, a ph...

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Autores principales: Huang, Yunfei, Mabrouk, Youssef, Gompper, Gerhard, Sabass, Benedikt
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9755218/
https://www.ncbi.nlm.nih.gov/pubmed/36522347
http://dx.doi.org/10.1038/s41598-022-25638-9
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author Huang, Yunfei
Mabrouk, Youssef
Gompper, Gerhard
Sabass, Benedikt
author_facet Huang, Yunfei
Mabrouk, Youssef
Gompper, Gerhard
Sabass, Benedikt
author_sort Huang, Yunfei
collection PubMed
description Automatic machine learning of empirical models from experimental data has recently become possible as a result of increased availability of computational power and dedicated algorithms. Despite the successes of non-parametric inference and neural-network-based inference for empirical modelling, a physical interpretation of the results often remains challenging. Here, we focus on direct inference of governing differential equations from data, which can be formulated as a linear inverse problem. A Bayesian framework with a Laplacian prior distribution is employed for finding sparse solutions efficiently. The superior accuracy and robustness of the method is demonstrated for various cases, including ordinary, partial, and stochastic differential equations. Furthermore, we develop an active learning procedure for the automated discovery of stochastic differential equations. In this procedure, learning of the unknown dynamical equations is coupled to the application of perturbations to the measured system in a feedback loop. We show that active learning can significantly improve the inference of global models for systems with multiple energetic minima.
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spelling pubmed-97552182022-12-17 Sparse inference and active learning of stochastic differential equations from data Huang, Yunfei Mabrouk, Youssef Gompper, Gerhard Sabass, Benedikt Sci Rep Article Automatic machine learning of empirical models from experimental data has recently become possible as a result of increased availability of computational power and dedicated algorithms. Despite the successes of non-parametric inference and neural-network-based inference for empirical modelling, a physical interpretation of the results often remains challenging. Here, we focus on direct inference of governing differential equations from data, which can be formulated as a linear inverse problem. A Bayesian framework with a Laplacian prior distribution is employed for finding sparse solutions efficiently. The superior accuracy and robustness of the method is demonstrated for various cases, including ordinary, partial, and stochastic differential equations. Furthermore, we develop an active learning procedure for the automated discovery of stochastic differential equations. In this procedure, learning of the unknown dynamical equations is coupled to the application of perturbations to the measured system in a feedback loop. We show that active learning can significantly improve the inference of global models for systems with multiple energetic minima. Nature Publishing Group UK 2022-12-15 /pmc/articles/PMC9755218/ /pubmed/36522347 http://dx.doi.org/10.1038/s41598-022-25638-9 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Huang, Yunfei
Mabrouk, Youssef
Gompper, Gerhard
Sabass, Benedikt
Sparse inference and active learning of stochastic differential equations from data
title Sparse inference and active learning of stochastic differential equations from data
title_full Sparse inference and active learning of stochastic differential equations from data
title_fullStr Sparse inference and active learning of stochastic differential equations from data
title_full_unstemmed Sparse inference and active learning of stochastic differential equations from data
title_short Sparse inference and active learning of stochastic differential equations from data
title_sort sparse inference and active learning of stochastic differential equations from data
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9755218/
https://www.ncbi.nlm.nih.gov/pubmed/36522347
http://dx.doi.org/10.1038/s41598-022-25638-9
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