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Convergent evolution and horizontal gene transfer in Arctic Ocean microalgae
Microbial communities in the world ocean are affected strongly by oceanic circulation, creating characteristic marine biomes. The high connectivity of most of the ocean makes it difficult to disentangle selective retention of colonizing genotypes (with traits suited to biome specific conditions) fro...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Life Science Alliance LLC
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9756366/ https://www.ncbi.nlm.nih.gov/pubmed/36522135 http://dx.doi.org/10.26508/lsa.202201833 |
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author | Dorrell, Richard G Kuo, Alan Füssy, Zoltan Richardson, Elisabeth H Salamov, Asaf Zarevski, Nikola Freyria, Nastasia J Ibarbalz, Federico M Jenkins, Jerry Pierella Karlusich, Juan Jose Stecca Steindorff, Andrei Edgar, Robyn E Handley, Lori Lail, Kathleen Lipzen, Anna Lombard, Vincent McFarlane, John Nef, Charlotte Novák Vanclová, Anna MG Peng, Yi Plott, Chris Potvin, Marianne Vieira, Fabio Rocha Jimenez Barry, Kerrie de Vargas, Colomban Henrissat, Bernard Pelletier, Eric Schmutz, Jeremy Wincker, Patrick Dacks, Joel B Bowler, Chris Grigoriev, Igor V Lovejoy, Connie |
author_facet | Dorrell, Richard G Kuo, Alan Füssy, Zoltan Richardson, Elisabeth H Salamov, Asaf Zarevski, Nikola Freyria, Nastasia J Ibarbalz, Federico M Jenkins, Jerry Pierella Karlusich, Juan Jose Stecca Steindorff, Andrei Edgar, Robyn E Handley, Lori Lail, Kathleen Lipzen, Anna Lombard, Vincent McFarlane, John Nef, Charlotte Novák Vanclová, Anna MG Peng, Yi Plott, Chris Potvin, Marianne Vieira, Fabio Rocha Jimenez Barry, Kerrie de Vargas, Colomban Henrissat, Bernard Pelletier, Eric Schmutz, Jeremy Wincker, Patrick Dacks, Joel B Bowler, Chris Grigoriev, Igor V Lovejoy, Connie |
author_sort | Dorrell, Richard G |
collection | PubMed |
description | Microbial communities in the world ocean are affected strongly by oceanic circulation, creating characteristic marine biomes. The high connectivity of most of the ocean makes it difficult to disentangle selective retention of colonizing genotypes (with traits suited to biome specific conditions) from evolutionary selection, which would act on founder genotypes over time. The Arctic Ocean is exceptional with limited exchange with other oceans and ice covered since the last ice age. To test whether Arctic microalgal lineages evolved apart from algae in the global ocean, we sequenced four lineages of microalgae isolated from Arctic waters and sea ice. Here we show convergent evolution and highlight geographically limited HGT as an ecological adaptive force in the form of PFAM complements and horizontal acquisition of key adaptive genes. Notably, ice-binding proteins were acquired and horizontally transferred among Arctic strains. A comparison with Tara Oceans metagenomes and metatranscriptomes confirmed mostly Arctic distributions of these IBPs. The phylogeny of Arctic-specific genes indicated that these events were independent of bacterial-sourced HGTs in Antarctic Southern Ocean microalgae. |
format | Online Article Text |
id | pubmed-9756366 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Life Science Alliance LLC |
record_format | MEDLINE/PubMed |
spelling | pubmed-97563662022-12-17 Convergent evolution and horizontal gene transfer in Arctic Ocean microalgae Dorrell, Richard G Kuo, Alan Füssy, Zoltan Richardson, Elisabeth H Salamov, Asaf Zarevski, Nikola Freyria, Nastasia J Ibarbalz, Federico M Jenkins, Jerry Pierella Karlusich, Juan Jose Stecca Steindorff, Andrei Edgar, Robyn E Handley, Lori Lail, Kathleen Lipzen, Anna Lombard, Vincent McFarlane, John Nef, Charlotte Novák Vanclová, Anna MG Peng, Yi Plott, Chris Potvin, Marianne Vieira, Fabio Rocha Jimenez Barry, Kerrie de Vargas, Colomban Henrissat, Bernard Pelletier, Eric Schmutz, Jeremy Wincker, Patrick Dacks, Joel B Bowler, Chris Grigoriev, Igor V Lovejoy, Connie Life Sci Alliance Research Articles Microbial communities in the world ocean are affected strongly by oceanic circulation, creating characteristic marine biomes. The high connectivity of most of the ocean makes it difficult to disentangle selective retention of colonizing genotypes (with traits suited to biome specific conditions) from evolutionary selection, which would act on founder genotypes over time. The Arctic Ocean is exceptional with limited exchange with other oceans and ice covered since the last ice age. To test whether Arctic microalgal lineages evolved apart from algae in the global ocean, we sequenced four lineages of microalgae isolated from Arctic waters and sea ice. Here we show convergent evolution and highlight geographically limited HGT as an ecological adaptive force in the form of PFAM complements and horizontal acquisition of key adaptive genes. Notably, ice-binding proteins were acquired and horizontally transferred among Arctic strains. A comparison with Tara Oceans metagenomes and metatranscriptomes confirmed mostly Arctic distributions of these IBPs. The phylogeny of Arctic-specific genes indicated that these events were independent of bacterial-sourced HGTs in Antarctic Southern Ocean microalgae. Life Science Alliance LLC 2022-12-15 /pmc/articles/PMC9756366/ /pubmed/36522135 http://dx.doi.org/10.26508/lsa.202201833 Text en © 2022 Dorrell et al. https://creativecommons.org/licenses/by/4.0/This article is available under a Creative Commons License (Attribution 4.0 International, as described at https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Research Articles Dorrell, Richard G Kuo, Alan Füssy, Zoltan Richardson, Elisabeth H Salamov, Asaf Zarevski, Nikola Freyria, Nastasia J Ibarbalz, Federico M Jenkins, Jerry Pierella Karlusich, Juan Jose Stecca Steindorff, Andrei Edgar, Robyn E Handley, Lori Lail, Kathleen Lipzen, Anna Lombard, Vincent McFarlane, John Nef, Charlotte Novák Vanclová, Anna MG Peng, Yi Plott, Chris Potvin, Marianne Vieira, Fabio Rocha Jimenez Barry, Kerrie de Vargas, Colomban Henrissat, Bernard Pelletier, Eric Schmutz, Jeremy Wincker, Patrick Dacks, Joel B Bowler, Chris Grigoriev, Igor V Lovejoy, Connie Convergent evolution and horizontal gene transfer in Arctic Ocean microalgae |
title | Convergent evolution and horizontal gene transfer in Arctic Ocean microalgae |
title_full | Convergent evolution and horizontal gene transfer in Arctic Ocean microalgae |
title_fullStr | Convergent evolution and horizontal gene transfer in Arctic Ocean microalgae |
title_full_unstemmed | Convergent evolution and horizontal gene transfer in Arctic Ocean microalgae |
title_short | Convergent evolution and horizontal gene transfer in Arctic Ocean microalgae |
title_sort | convergent evolution and horizontal gene transfer in arctic ocean microalgae |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9756366/ https://www.ncbi.nlm.nih.gov/pubmed/36522135 http://dx.doi.org/10.26508/lsa.202201833 |
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