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Convergent evolution and horizontal gene transfer in Arctic Ocean microalgae

Microbial communities in the world ocean are affected strongly by oceanic circulation, creating characteristic marine biomes. The high connectivity of most of the ocean makes it difficult to disentangle selective retention of colonizing genotypes (with traits suited to biome specific conditions) fro...

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Autores principales: Dorrell, Richard G, Kuo, Alan, Füssy, Zoltan, Richardson, Elisabeth H, Salamov, Asaf, Zarevski, Nikola, Freyria, Nastasia J, Ibarbalz, Federico M, Jenkins, Jerry, Pierella Karlusich, Juan Jose, Stecca Steindorff, Andrei, Edgar, Robyn E, Handley, Lori, Lail, Kathleen, Lipzen, Anna, Lombard, Vincent, McFarlane, John, Nef, Charlotte, Novák Vanclová, Anna MG, Peng, Yi, Plott, Chris, Potvin, Marianne, Vieira, Fabio Rocha Jimenez, Barry, Kerrie, de Vargas, Colomban, Henrissat, Bernard, Pelletier, Eric, Schmutz, Jeremy, Wincker, Patrick, Dacks, Joel B, Bowler, Chris, Grigoriev, Igor V, Lovejoy, Connie
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Life Science Alliance LLC 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9756366/
https://www.ncbi.nlm.nih.gov/pubmed/36522135
http://dx.doi.org/10.26508/lsa.202201833
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author Dorrell, Richard G
Kuo, Alan
Füssy, Zoltan
Richardson, Elisabeth H
Salamov, Asaf
Zarevski, Nikola
Freyria, Nastasia J
Ibarbalz, Federico M
Jenkins, Jerry
Pierella Karlusich, Juan Jose
Stecca Steindorff, Andrei
Edgar, Robyn E
Handley, Lori
Lail, Kathleen
Lipzen, Anna
Lombard, Vincent
McFarlane, John
Nef, Charlotte
Novák Vanclová, Anna MG
Peng, Yi
Plott, Chris
Potvin, Marianne
Vieira, Fabio Rocha Jimenez
Barry, Kerrie
de Vargas, Colomban
Henrissat, Bernard
Pelletier, Eric
Schmutz, Jeremy
Wincker, Patrick
Dacks, Joel B
Bowler, Chris
Grigoriev, Igor V
Lovejoy, Connie
author_facet Dorrell, Richard G
Kuo, Alan
Füssy, Zoltan
Richardson, Elisabeth H
Salamov, Asaf
Zarevski, Nikola
Freyria, Nastasia J
Ibarbalz, Federico M
Jenkins, Jerry
Pierella Karlusich, Juan Jose
Stecca Steindorff, Andrei
Edgar, Robyn E
Handley, Lori
Lail, Kathleen
Lipzen, Anna
Lombard, Vincent
McFarlane, John
Nef, Charlotte
Novák Vanclová, Anna MG
Peng, Yi
Plott, Chris
Potvin, Marianne
Vieira, Fabio Rocha Jimenez
Barry, Kerrie
de Vargas, Colomban
Henrissat, Bernard
Pelletier, Eric
Schmutz, Jeremy
Wincker, Patrick
Dacks, Joel B
Bowler, Chris
Grigoriev, Igor V
Lovejoy, Connie
author_sort Dorrell, Richard G
collection PubMed
description Microbial communities in the world ocean are affected strongly by oceanic circulation, creating characteristic marine biomes. The high connectivity of most of the ocean makes it difficult to disentangle selective retention of colonizing genotypes (with traits suited to biome specific conditions) from evolutionary selection, which would act on founder genotypes over time. The Arctic Ocean is exceptional with limited exchange with other oceans and ice covered since the last ice age. To test whether Arctic microalgal lineages evolved apart from algae in the global ocean, we sequenced four lineages of microalgae isolated from Arctic waters and sea ice. Here we show convergent evolution and highlight geographically limited HGT as an ecological adaptive force in the form of PFAM complements and horizontal acquisition of key adaptive genes. Notably, ice-binding proteins were acquired and horizontally transferred among Arctic strains. A comparison with Tara Oceans metagenomes and metatranscriptomes confirmed mostly Arctic distributions of these IBPs. The phylogeny of Arctic-specific genes indicated that these events were independent of bacterial-sourced HGTs in Antarctic Southern Ocean microalgae.
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spelling pubmed-97563662022-12-17 Convergent evolution and horizontal gene transfer in Arctic Ocean microalgae Dorrell, Richard G Kuo, Alan Füssy, Zoltan Richardson, Elisabeth H Salamov, Asaf Zarevski, Nikola Freyria, Nastasia J Ibarbalz, Federico M Jenkins, Jerry Pierella Karlusich, Juan Jose Stecca Steindorff, Andrei Edgar, Robyn E Handley, Lori Lail, Kathleen Lipzen, Anna Lombard, Vincent McFarlane, John Nef, Charlotte Novák Vanclová, Anna MG Peng, Yi Plott, Chris Potvin, Marianne Vieira, Fabio Rocha Jimenez Barry, Kerrie de Vargas, Colomban Henrissat, Bernard Pelletier, Eric Schmutz, Jeremy Wincker, Patrick Dacks, Joel B Bowler, Chris Grigoriev, Igor V Lovejoy, Connie Life Sci Alliance Research Articles Microbial communities in the world ocean are affected strongly by oceanic circulation, creating characteristic marine biomes. The high connectivity of most of the ocean makes it difficult to disentangle selective retention of colonizing genotypes (with traits suited to biome specific conditions) from evolutionary selection, which would act on founder genotypes over time. The Arctic Ocean is exceptional with limited exchange with other oceans and ice covered since the last ice age. To test whether Arctic microalgal lineages evolved apart from algae in the global ocean, we sequenced four lineages of microalgae isolated from Arctic waters and sea ice. Here we show convergent evolution and highlight geographically limited HGT as an ecological adaptive force in the form of PFAM complements and horizontal acquisition of key adaptive genes. Notably, ice-binding proteins were acquired and horizontally transferred among Arctic strains. A comparison with Tara Oceans metagenomes and metatranscriptomes confirmed mostly Arctic distributions of these IBPs. The phylogeny of Arctic-specific genes indicated that these events were independent of bacterial-sourced HGTs in Antarctic Southern Ocean microalgae. Life Science Alliance LLC 2022-12-15 /pmc/articles/PMC9756366/ /pubmed/36522135 http://dx.doi.org/10.26508/lsa.202201833 Text en © 2022 Dorrell et al. https://creativecommons.org/licenses/by/4.0/This article is available under a Creative Commons License (Attribution 4.0 International, as described at https://creativecommons.org/licenses/by/4.0/).
spellingShingle Research Articles
Dorrell, Richard G
Kuo, Alan
Füssy, Zoltan
Richardson, Elisabeth H
Salamov, Asaf
Zarevski, Nikola
Freyria, Nastasia J
Ibarbalz, Federico M
Jenkins, Jerry
Pierella Karlusich, Juan Jose
Stecca Steindorff, Andrei
Edgar, Robyn E
Handley, Lori
Lail, Kathleen
Lipzen, Anna
Lombard, Vincent
McFarlane, John
Nef, Charlotte
Novák Vanclová, Anna MG
Peng, Yi
Plott, Chris
Potvin, Marianne
Vieira, Fabio Rocha Jimenez
Barry, Kerrie
de Vargas, Colomban
Henrissat, Bernard
Pelletier, Eric
Schmutz, Jeremy
Wincker, Patrick
Dacks, Joel B
Bowler, Chris
Grigoriev, Igor V
Lovejoy, Connie
Convergent evolution and horizontal gene transfer in Arctic Ocean microalgae
title Convergent evolution and horizontal gene transfer in Arctic Ocean microalgae
title_full Convergent evolution and horizontal gene transfer in Arctic Ocean microalgae
title_fullStr Convergent evolution and horizontal gene transfer in Arctic Ocean microalgae
title_full_unstemmed Convergent evolution and horizontal gene transfer in Arctic Ocean microalgae
title_short Convergent evolution and horizontal gene transfer in Arctic Ocean microalgae
title_sort convergent evolution and horizontal gene transfer in arctic ocean microalgae
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9756366/
https://www.ncbi.nlm.nih.gov/pubmed/36522135
http://dx.doi.org/10.26508/lsa.202201833
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